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Chlorine in PDB 1nyc: Staphostatins Resemble Lipocalins, Not Cystatins in Fold.

Protein crystallography data

The structure of Staphostatins Resemble Lipocalins, Not Cystatins in Fold., PDB code: 1nyc was solved by M.Rzychon, R.Filipek, A.Sabat, K.Kosowska, A.Dubin, J.Potempa, M.Bochtler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.196, 77.049, 101.271, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 22.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Staphostatins Resemble Lipocalins, Not Cystatins in Fold. (pdb code 1nyc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Staphostatins Resemble Lipocalins, Not Cystatins in Fold., PDB code: 1nyc:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1nyc

Go back to Chlorine Binding Sites List in 1nyc
Chlorine binding site 1 out of 2 in the Staphostatins Resemble Lipocalins, Not Cystatins in Fold.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Staphostatins Resemble Lipocalins, Not Cystatins in Fold. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl261

b:47.9
occ:1.00
O A:HOH280 3.6 32.8 1.0
N A:ASN51 3.6 25.1 1.0
N B:GLY-1 3.6 36.6 1.0
CB A:HIS50 3.7 32.5 1.0
CA A:HIS50 3.9 30.8 1.0
CA B:GLY-1 4.0 35.4 1.0
CG A:HIS50 4.3 37.3 1.0
C A:HIS50 4.3 28.4 1.0
CD2 A:HIS50 4.4 41.7 1.0
CA A:ASN51 4.5 23.7 1.0
O A:HOH346 4.7 54.1 1.0
ND2 A:ASN51 5.0 27.2 1.0

Chlorine binding site 2 out of 2 in 1nyc

Go back to Chlorine Binding Sites List in 1nyc
Chlorine binding site 2 out of 2 in the Staphostatins Resemble Lipocalins, Not Cystatins in Fold.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Staphostatins Resemble Lipocalins, Not Cystatins in Fold. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl262

b:58.3
occ:1.00
N A:GLY-1 3.2 40.3 1.0
N B:ASN51 3.2 22.9 1.0
O B:HOH150 3.6 33.2 1.0
CA A:GLY-1 3.7 40.3 1.0
CB B:HIS50 3.8 24.7 1.0
CA B:HIS50 4.0 23.3 1.0
ND1 B:HIS50 4.0 38.2 1.0
C B:HIS50 4.1 23.0 1.0
CA B:ASN51 4.1 22.2 1.0
CG B:HIS50 4.3 30.7 1.0
OD1 B:ASN51 4.4 28.5 1.0
CG B:ASN51 4.6 24.2 1.0

Reference:

M.Rzychon, R.Filipek, A.Sabat, K.Kosowska, A.Dubin, J.Potempa, M.Bochtler. Staphostatins Resemble Lipocalins, Not Cystatins in Fold. Protein Sci. V. 12 2252 2003.
ISSN: ISSN 0961-8368
PubMed: 14500882
DOI: 10.1110/PS.03247703
Page generated: Sat Jul 20 00:41:59 2024

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