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Chlorine in PDB 1ok8: Crystal Structure of the Dengue 2 Virus Envelope Glycoprotein in the Postfusion Conformation

Protein crystallography data

The structure of Crystal Structure of the Dengue 2 Virus Envelope Glycoprotein in the Postfusion Conformation, PDB code: 1ok8 was solved by Y.Modis, S.C.Harrison, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.29 / 2.0
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.151, 76.151, 130.775, 90.00, 90.00, 120.00
R / Rfree (%) 22.2 / 26.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Dengue 2 Virus Envelope Glycoprotein in the Postfusion Conformation (pdb code 1ok8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Dengue 2 Virus Envelope Glycoprotein in the Postfusion Conformation, PDB code: 1ok8:

Chlorine binding site 1 out of 1 in 1ok8

Go back to Chlorine Binding Sites List in 1ok8
Chlorine binding site 1 out of 1 in the Crystal Structure of the Dengue 2 Virus Envelope Glycoprotein in the Postfusion Conformation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Dengue 2 Virus Envelope Glycoprotein in the Postfusion Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1396

b:27.1
occ:0.50
O A:HOH2068 3.4 20.1 1.0
N A:LYS110 3.6 15.7 1.0
CG A:LYS110 3.8 22.4 1.0
CB A:LYS110 3.9 17.2 1.0
CA A:LYS110 4.3 17.2 1.0
CA A:GLY109 4.5 22.4 1.0
C A:GLY109 4.6 17.7 1.0
O A:LYS110 4.7 22.5 1.0

Reference:

Y.Modis, S.Ogata, D.Clements, S.C.Harrison. Structure of the Dengue Virus Envelope Protein After Membrane Fusion Nature V. 427 313 2004.
ISSN: ISSN 0028-0836
PubMed: 14737159
DOI: 10.1038/NATURE02165
Page generated: Thu Jul 10 18:42:00 2025

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