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Chlorine in PDB 1qsb: The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme

Enzymatic activity of The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme

All present enzymatic activity of The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme, PDB code: 1qsb was solved by R.Liu, W.A.Baase, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 9.10 / 1.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.990, 60.990, 96.960, 90.00, 90.00, 120.00
R / Rfree (%) 16 / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme (pdb code 1qsb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme, PDB code: 1qsb:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1qsb

Go back to Chlorine Binding Sites List in 1qsb
Chlorine binding site 1 out of 2 in the The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:60.4
occ:1.00
O A:HOH209 2.8 38.0 1.0
N A:ARG145 3.0 14.2 1.0
N A:ASN144 3.3 11.7 1.0
CB A:THR142 3.5 16.0 1.0
CB A:ARG145 3.5 15.0 1.0
C A:THR142 3.5 21.6 1.0
CB A:ASN144 3.6 15.1 1.0
CA A:THR142 3.7 11.0 1.0
O A:THR142 3.7 14.2 1.0
CA A:ASN144 3.7 14.2 1.0
C A:ASN144 3.8 20.5 1.0
CA A:ARG145 3.9 12.7 1.0
N A:PRO143 4.0 17.3 1.0
O A:HOH396 4.1 54.1 1.0
C A:PRO143 4.2 16.8 1.0
CG2 A:THR142 4.3 15.9 1.0
O A:HOH230 4.4 44.6 1.0
CD A:PRO143 4.6 17.4 1.0
CG A:ASN144 4.6 32.5 1.0
CA A:PRO143 4.7 15.6 1.0
OG1 A:THR142 4.8 18.9 1.0
N A:ALA146 4.9 11.9 1.0
O A:HOH237 5.0 44.2 1.0
C A:ARG145 5.0 15.6 1.0
ND2 A:ASN144 5.0 37.3 1.0
O A:ASN144 5.0 17.7 1.0

Chlorine binding site 2 out of 2 in 1qsb

Go back to Chlorine Binding Sites List in 1qsb
Chlorine binding site 2 out of 2 in the The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:37.8
occ:0.50
O A:HOH215 2.9 27.5 1.0
O A:HOH182 3.2 22.9 1.0
O A:HOH200 3.4 36.8 1.0
O A:HOH246 3.9 55.3 1.0
CB A:ALA49 3.9 20.7 1.0
CE1 A:HIS31 4.0 14.7 1.0
NE2 A:GLN69 4.1 17.1 1.0
NE2 A:HIS31 4.3 15.0 1.0
CA A:ALA49 4.4 22.9 1.0
CD2 A:LEU66 4.5 23.3 1.0
O A:HOH282 4.6 43.7 1.0
O A:HOH202 4.8 72.0 1.0
O A:ALA49 4.9 16.2 1.0

Reference:

R.Liu, W.A.Baase, B.W.Matthews. The Introduction of Strain and Its Effects on the Structure and Stability of T4 Lysozyme. J.Mol.Biol. V. 295 127 2000.
ISSN: ISSN 0022-2836
PubMed: 10623513
DOI: 10.1006/JMBI.1999.3300
Page generated: Thu Jul 10 19:07:15 2025

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