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Chlorine in PDB 1vpd: X-Ray Crystal Structure of Tartronate Semialdehyde Reductase [Salmonella Typhimurium LT2]

Protein crystallography data

The structure of X-Ray Crystal Structure of Tartronate Semialdehyde Reductase [Salmonella Typhimurium LT2], PDB code: 1vpd was solved by J.Osipiuk, M.Zhou, S.Moy, F.Collart, A.Joachimiak, Midwest Centerfor Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.65
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 55.275, 105.428, 155.045, 90.00, 90.00, 90.00
R / Rfree (%) 12 / 14.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Crystal Structure of Tartronate Semialdehyde Reductase [Salmonella Typhimurium LT2] (pdb code 1vpd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Crystal Structure of Tartronate Semialdehyde Reductase [Salmonella Typhimurium LT2], PDB code: 1vpd:

Chlorine binding site 1 out of 1 in 1vpd

Go back to Chlorine Binding Sites List in 1vpd
Chlorine binding site 1 out of 1 in the X-Ray Crystal Structure of Tartronate Semialdehyde Reductase [Salmonella Typhimurium LT2]


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Crystal Structure of Tartronate Semialdehyde Reductase [Salmonella Typhimurium LT2] within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:10.4
occ:1.00
O A:HOH781 3.2 35.6 1.0
N A:SER69 3.3 15.9 1.0
O A:HOH618 3.3 26.6 1.0
ND2 A:ASN244 3.3 12.7 1.0
N A:ALA99 3.4 12.7 1.0
OG A:SER69 3.6 17.7 0.5
CB A:SER69 3.6 16.5 0.5
CB A:SER69 3.7 16.4 0.5
CA A:ILE98 3.7 11.8 1.0
CB A:ILE98 3.9 12.0 1.0
C A:ILE98 4.0 12.5 1.0
CA A:SER69 4.1 16.1 1.0
CB A:ASN68 4.1 17.6 1.0
CD A:LYS240 4.1 13.2 1.0
CA A:ASN68 4.2 16.9 1.0
OD1 A:ASN244 4.2 12.6 1.0
CG A:ASN244 4.2 11.7 1.0
C A:ASN68 4.2 16.3 1.0
CB A:ALA99 4.3 13.7 1.0
CG A:LYS240 4.4 13.2 1.0
CG2 A:ILE98 4.4 11.9 1.0
CA A:ALA99 4.4 13.2 1.0
O A:SER97 4.6 12.5 1.0
O A:HOH644 4.7 31.6 1.0
CD A:PRO70 4.9 18.3 1.0
OG A:SER69 4.9 17.8 0.5
N A:ILE98 4.9 12.2 1.0

Reference:

J.Osipiuk, M.Zhou, S.Moy, F.Collart, A.Joachimiak. X-Ray Crystal Structure of Garr-Tartronate Semialdehyde Reductase From Salmonella Typhimurium. J Struct Funct Genomics V. 10 249 2009.
ISSN: ISSN 1345-711X
PubMed: 19184529
DOI: 10.1007/S10969-009-9059-X
Page generated: Thu Jul 10 19:54:27 2025

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