Atomistry » Chlorine » PDB 1vq5-1wbo » 1w07
Atomistry »
  Chlorine »
    PDB 1vq5-1wbo »
      1w07 »

Chlorine in PDB 1w07: Arabidopsis Thaliana Acyl-Coa Oxidase 1

Enzymatic activity of Arabidopsis Thaliana Acyl-Coa Oxidase 1

All present enzymatic activity of Arabidopsis Thaliana Acyl-Coa Oxidase 1:
1.3.3.6;

Protein crystallography data

The structure of Arabidopsis Thaliana Acyl-Coa Oxidase 1, PDB code: 1w07 was solved by A.Henriksen, L.Pedersen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.59 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 85.201, 117.001, 131.047, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 24.9

Other elements in 1w07:

The structure of Arabidopsis Thaliana Acyl-Coa Oxidase 1 also contains other interesting chemical elements:

Platinum (Pt) 6 atoms
Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Arabidopsis Thaliana Acyl-Coa Oxidase 1 (pdb code 1w07). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Arabidopsis Thaliana Acyl-Coa Oxidase 1, PDB code: 1w07:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1w07

Go back to Chlorine Binding Sites List in 1w07
Chlorine binding site 1 out of 2 in the Arabidopsis Thaliana Acyl-Coa Oxidase 1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Arabidopsis Thaliana Acyl-Coa Oxidase 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1662

b:38.6
occ:1.00
N A:ASN231 3.0 16.6 1.0
N B:GLY230 3.1 17.9 1.0
ND2 A:ASN231 3.4 25.6 1.0
CB A:ASN231 3.5 22.8 1.0
O B:HOH2120 3.7 36.8 1.0
CA A:GLY230 3.8 17.8 1.0
CA B:MET229 3.8 17.6 1.0
CA A:ASN231 3.8 15.7 1.0
CB A:PRO411 3.8 17.6 1.0
C A:GLY230 3.8 17.1 1.0
CG A:ASN231 3.9 27.3 1.0
C B:MET229 3.9 16.9 1.0
CA B:GLY230 4.0 16.3 1.0
C A:PRO411 4.1 16.3 1.0
N A:GLU412 4.1 15.0 1.0
O A:PRO411 4.3 13.1 1.0
CD1 A:TRP406 4.3 28.8 1.0
O A:ASN231 4.4 16.9 1.0
CA A:GLU412 4.5 15.5 1.0
CG B:MET229 4.5 21.1 1.0
CA A:PRO411 4.6 16.3 1.0
CB B:MET229 4.6 18.9 1.0
C A:ASN231 4.6 14.3 1.0
O B:LYS228 4.7 10.9 1.0
C B:GLY230 4.7 18.0 1.0
N B:MET229 4.8 17.2 1.0
CB A:GLU412 4.9 15.3 1.0

Chlorine binding site 2 out of 2 in 1w07

Go back to Chlorine Binding Sites List in 1w07
Chlorine binding site 2 out of 2 in the Arabidopsis Thaliana Acyl-Coa Oxidase 1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Arabidopsis Thaliana Acyl-Coa Oxidase 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1661

b:18.9
occ:1.00
O B:HOH2251 3.1 23.0 1.0
N A:GLY230 3.2 14.7 1.0
N B:ASN231 3.2 19.3 1.0
ND2 B:ASN231 3.6 20.0 1.0
CD1 B:TRP406 3.7 19.5 1.0
CA B:GLY230 3.8 16.3 1.0
CB B:PRO411 3.8 13.2 1.0
CA A:MET229 3.8 15.7 1.0
CB B:ASN231 3.9 20.6 1.0
C B:GLY230 4.0 18.0 1.0
C A:MET229 4.0 17.4 1.0
C B:PRO411 4.0 11.7 1.0
NE1 B:TRP406 4.1 21.8 1.0
CA A:GLY230 4.1 17.8 1.0
N B:GLU412 4.1 10.8 1.0
CA B:ASN231 4.1 18.4 1.0
CG B:ASN231 4.2 23.8 1.0
O B:PRO411 4.2 9.8 1.0
CG A:MET229 4.3 19.9 1.0
O B:ASN231 4.4 12.5 1.0
CA B:GLU412 4.4 10.9 1.0
CA B:PRO411 4.5 12.2 1.0
CB A:MET229 4.6 17.2 1.0
O A:LYS228 4.7 16.1 1.0
C B:ASN231 4.7 16.6 1.0
C A:GLY230 4.8 17.1 1.0
O B:HOH2120 4.8 36.8 1.0
N A:MET229 4.9 17.1 1.0
CB B:GLU412 4.9 9.5 1.0
CG B:TRP406 5.0 15.8 1.0

Reference:

L.Pedersen, A.Henriksen. Acyl-Coa Oxidase 1 From Arabidopsis Thaliana. Structure of A Key Enzyme in Plant Lipid Metabolism J.Mol.Biol. V. 345 487 2005.
ISSN: ISSN 0022-2836
PubMed: 15581893
DOI: 10.1016/J.JMB.2004.10.062
Page generated: Thu Jul 10 20:10:36 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy