Chlorine in PDB 1yp6: Van Der Waals Interactions Dominate Hydrophobic Association in A Protein Binding Site Occluded From Solvent Water

The structure of Van Der Waals Interactions Dominate Hydrophobic Association in A Protein Binding Site Occluded From Solvent Water, PDB code: 1yp6 was solved by E.Barratt, R.J.Bingham, D.J.Warner, C.A.Laughton, S.E.V.Phillips, S.W.Homans, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.80
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	53.834, 53.834, 137.422, 90.00, 90.00, 90.00
R / Rfree (%)	19.3 / 22

The structure of Van Der Waals Interactions Dominate Hydrophobic Association in A Protein Binding Site Occluded From Solvent Water also contains other interesting chemical elements:

Cadmium

(Cd)

2 atoms

The binding sites of Chlorine atom in the Van Der Waals Interactions Dominate Hydrophobic Association in A Protein Binding Site Occluded From Solvent Water (pdb code 1yp6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Van Der Waals Interactions Dominate Hydrophobic Association in A Protein Binding Site Occluded From Solvent Water, PDB code: 1yp6:

Chlorine binding site 1 out of 1 in the Van Der Waals Interactions Dominate Hydrophobic Association in A Protein Binding Site Occluded From Solvent Water


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Van Der Waals Interactions Dominate Hydrophobic Association in A Protein Binding Site Occluded From Solvent Water within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl202 b:20.1 occ:1.00 O A:HOH284 2.5 20.4 1.0 OE2 A:GLU140 2.6 27.9 1.0 O A:HOH360 2.6 34.9 1.0 CD A:GLU140 3.5 22.7 1.0 CG A:GLU140 3.6 18.9 1.0 NE2 A:GLN136 4.1 10.5 1.0 O A:HOH309 4.2 42.9 1.0 O A:GLN136 4.4 12.4 1.0 CB A:GLN136 4.5 11.0 1.0 O A:HOH387 4.6 34.9 1.0 OE1 A:GLU140 4.6 25.2 1.0 O A:HOH418 4.8 8.5 1.0 C A:GLN136 4.9 12.2 1.0

E.Barratt, R.J.Bingham, D.J.Warner, C.A.Laughton, S.E.V.Phillips, S.W.Homans. Van Der Waals Interactions Dominate Ligand-Protein Association in A Protein Binding Site Occluded From Solvent Water J.Am.Chem.Soc. V. 127 11827 2005.
ISSN: ISSN 0002-7863
PubMed: 16104761
DOI: 10.1021/JA0527525