Atomistry » Chlorine » PDB 2ajf-2axw » 2aoh
Atomistry »
  Chlorine »
    PDB 2ajf-2axw »
      2aoh »

Chlorine in PDB 2aoh: Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr

Enzymatic activity of Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr

All present enzymatic activity of Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr:
3.4.23.16;

Protein crystallography data

The structure of Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr, PDB code: 2aoh was solved by Y.Tie, P.I.Boross, Y.F.Wang, L.Gaddis, F.Liu, X.Chen, J.Tozser, R.W.Harrison, I.T.Weber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.42
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 58.882, 86.283, 46.404, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 23.3

Other elements in 2aoh:

The structure of Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr (pdb code 2aoh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr, PDB code: 2aoh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2aoh

Go back to Chlorine Binding Sites List in 2aoh
Chlorine binding site 1 out of 2 in the Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:22.2
occ:1.00
O A:HOH1013 3.3 17.1 1.0
NE1 B:TRP106 3.3 14.3 1.0
CZ2 B:TRP106 3.8 14.0 1.0
CE2 B:TRP106 3.9 14.6 1.0
CG2 B:THR104 4.4 22.6 1.0
CD1 B:TRP106 4.5 13.5 1.0
O B:HOH1111 4.9 34.9 1.0
CB B:THR104 4.9 16.7 1.0

Chlorine binding site 2 out of 2 in 2aoh

Go back to Chlorine Binding Sites List in 2aoh
Chlorine binding site 2 out of 2 in the Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure Analysis of Hiv-1 Protease Mutant V82A with A Substrate Analog P6-Pr within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:9.1
occ:0.50
O B:HOH1030 3.1 22.8 1.0
O B:HOH1145 3.1 25.1 1.0
N B:THR174 3.2 13.2 1.0
ND2 B:ASN188 3.3 13.3 1.0
CA B:GLY173 3.8 13.8 1.0
CB B:ASN188 3.9 13.2 1.0
CB B:THR174 3.9 13.7 1.0
OG1 B:THR174 3.9 17.6 1.0
C B:GLY173 4.0 13.1 1.0
CG B:ASN188 4.1 12.4 1.0
CA B:THR174 4.1 12.5 1.0
NE2 B:GLN192 4.3 15.6 1.0
O B:HOH1059 4.3 17.7 1.0
O B:ASN188 4.5 14.2 1.0
CD2 B:LEU189 4.6 19.7 1.0
O B:THR174 4.7 12.5 1.0
C B:ASN188 4.8 12.5 1.0
CA B:ASN188 4.8 11.6 1.0
O B:HOH1148 4.9 37.1 1.0
C B:THR174 4.9 12.6 1.0
O B:HOH1058 5.0 23.1 1.0

Reference:

Y.Tie, P.I.Boross, Y.F.Wang, L.Gaddis, F.Liu, X.Chen, J.Tozser, R.W.Harrison, I.T.Weber. Molecular Basis For Substrate Recognition and Drug Resistance From 1.1 to 1.6 Angstroms Resolution Crystal Structures of Hiv-1 Protease Mutants with Substrate Analogs. Febs J. V. 272 5265 2005.
ISSN: ISSN 1742-464X
PubMed: 16218957
DOI: 10.1111/J.1742-4658.2005.04923.X
Page generated: Thu Jul 10 21:11:48 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy