Atomistry » Chlorine » PDB 2bdg-2bl9 » 2bk9
Atomistry »
  Chlorine »
    PDB 2bdg-2bl9 »
      2bk9 »

Chlorine in PDB 2bk9: Drosophila Melanogaster Globin

Protein crystallography data

The structure of Drosophila Melanogaster Globin, PDB code: 2bk9 was solved by D.De Sanctis, S.Dewilde, A.Pesce, L.Moens, P.Ascenzi, T.Hankeln, T.Burmester, M.Ponassi, M.Nardini, M.Bolognesi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.75 / 1.2
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.752, 55.835, 56.163, 90.00, 90.00, 90.00
R / Rfree (%) 10.1 / 13.4

Other elements in 2bk9:

The structure of Drosophila Melanogaster Globin also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Iron (Fe) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Drosophila Melanogaster Globin (pdb code 2bk9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Drosophila Melanogaster Globin, PDB code: 2bk9:

Chlorine binding site 1 out of 1 in 2bk9

Go back to Chlorine Binding Sites List in 2bk9
Chlorine binding site 1 out of 1 in the Drosophila Melanogaster Globin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Drosophila Melanogaster Globin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1158

b:19.4
occ:1.00
H A:SER37 2.4 6.0 1.0
O A:HOH2096 2.7 30.3 1.0
H1 A:HOH2099 2.7 13.1 0.5
H1 A:HOH2096 2.7 30.3 1.0
HB3 A:SER37 2.9 7.5 1.0
HA A:PHE35 2.9 5.0 1.0
O A:HOH2099 3.0 13.1 0.5
HD2 A:PRO36 3.0 6.1 1.0
H2 A:HOH2096 3.1 30.3 1.0
N A:SER37 3.2 5.8 1.0
OG A:SER37 3.2 10.1 1.0
HG A:SER37 3.4 10.3 0.0
CB A:SER37 3.4 8.5 1.0
N A:PRO36 3.5 5.5 1.0
C A:PHE35 3.5 4.8 1.0
HG2 A:PRO36 3.5 7.0 1.0
CA A:PHE35 3.6 4.9 1.0
CD A:PRO36 3.6 6.5 1.0
HB3 A:PHE35 3.7 5.2 1.0
H2 A:HOH2099 3.7 13.1 0.5
CA A:SER37 3.9 6.6 1.0
CG A:PRO36 4.0 7.2 1.0
O A:PHE35 4.1 5.1 1.0
HD1 A:PHE35 4.2 6.9 1.0
CB A:PHE35 4.2 5.3 1.0
C A:PRO36 4.2 5.9 1.0
HB2 A:SER37 4.3 7.7 1.0
HE22 A:GLN108 4.3 7.1 0.0
CA A:PRO36 4.3 5.9 1.0
HD3 A:PRO36 4.5 6.1 1.0
H A:ASN38 4.5 5.4 1.0
HA A:SER37 4.5 6.7 1.0
O A:ARG34 4.7 6.6 1.0
HG3 A:PRO36 4.8 6.7 1.0
N A:PHE35 4.8 5.2 1.0
CB A:PRO36 4.8 6.6 1.0
HB2 A:PHE35 4.9 5.2 1.0
CD1 A:PHE35 4.9 6.9 1.0
HD21 A:ASN38 4.9 6.1 0.0
NE2 A:GLN108 4.9 7.2 1.0

Reference:

D.De Sanctis, S.Dewilde, C.Vonrhein, A.Pesce, L.Moens, P.Ascenzi, T.Hankeln, T.Burmester, M.Ponassi, M.Nardini, M.Bolognesi. Bishistidyl Heme Hexacoordination, A Key Structural Property in Drosophila Melanogaster Hemoglobin J.Biol.Chem. V. 280 27222 2005.
ISSN: ISSN 0021-9258
PubMed: 15917230
DOI: 10.1074/JBC.M503814200
Page generated: Thu Jul 10 21:27:51 2025

Last articles

Mg in 4L9Z
Mg in 4L9Y
Mg in 4LA6
Mg in 4L9W
Mg in 4L81
Mg in 4L9S
Mg in 4L8N
Mg in 4L87
Mg in 4L8G
Mg in 4L80
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy