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Chlorine in PDB 2dct: Crystal Structure of the TT1209 From Thermus Thermophilus HB8

Protein crystallography data

The structure of Crystal Structure of the TT1209 From Thermus Thermophilus HB8, PDB code: 2dct was solved by Y.Asada, M.Sugahara, K.Shimizu, H.Yamamoto, H.Shimada, T.Nakamoto, N.Ono, N.Kunishima, Riken Structural Genomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.78 / 1.45
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 62.241, 62.241, 151.110, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 20.9

Other elements in 2dct:

The structure of Crystal Structure of the TT1209 From Thermus Thermophilus HB8 also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the TT1209 From Thermus Thermophilus HB8 (pdb code 2dct). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the TT1209 From Thermus Thermophilus HB8, PDB code: 2dct:

Chlorine binding site 1 out of 1 in 2dct

Go back to Chlorine Binding Sites List in 2dct
Chlorine binding site 1 out of 1 in the Crystal Structure of the TT1209 From Thermus Thermophilus HB8


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the TT1209 From Thermus Thermophilus HB8 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2001

b:17.5
occ:0.50
O B:HOH2181 2.9 29.2 1.0
NH2 B:ARG104 3.1 13.0 1.0
NH1 B:ARG104 3.3 11.4 1.0
CZ B:ARG104 3.7 11.8 1.0
O B:HOH2004 3.7 10.9 1.0
CG B:GLN24 4.1 23.6 1.0
O B:HOH2009 4.3 10.7 1.0
CA B:GLN24 4.5 14.4 1.0
CD2 B:LEU29 4.6 12.5 1.0
CB B:PRO21 4.6 15.1 1.0
O B:PHE23 4.7 15.0 1.0
CB B:GLN24 4.7 17.5 1.0
NE2 B:GLN24 4.8 30.7 1.0
CG B:PRO21 5.0 15.3 1.0
CD B:GLN24 5.0 26.4 1.0
NE B:ARG104 5.0 12.6 1.0

Reference:

Y.Asada, M.Sugahara, K.Shimizu, H.Yamamoto, H.Shimada, Y.Misumi, T.Nakamoto, N.Ono, N.Kunishima. Crystal Structure of the TT1209 From Thermus Thermophilus HB8 To Be Published.
Page generated: Sat Jul 20 06:30:03 2024

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