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Chlorine in PDB 2ebo: Core Structure of GP2 From Ebola Virus

Protein crystallography data

The structure of Core Structure of GP2 From Ebola Virus, PDB code: 2ebo was solved by V.N.Malashkevich, B.J.Schneider, M.L.Mcnally, M.A.Milhollen, J.X.Pang, P.S.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.90
Space group P 62
Cell size a, b, c (Å), α, β, γ (°) 75.660, 75.660, 67.930, 90.00, 90.00, 120.00
R / Rfree (%) 20.5 / 27

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Core Structure of GP2 From Ebola Virus (pdb code 2ebo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Core Structure of GP2 From Ebola Virus, PDB code: 2ebo:

Chlorine binding site 1 out of 1 in 2ebo

Go back to Chlorine Binding Sites List in 2ebo
Chlorine binding site 1 out of 1 in the Core Structure of GP2 From Ebola Virus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Core Structure of GP2 From Ebola Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1

b:24.1
occ:1.00
OG A:SER583 3.1 30.2 1.0
ND2 B:ASN586 3.2 21.3 1.0
ND2 C:ASN586 3.3 24.2 1.0
ND2 A:ASN586 3.3 26.6 1.0
OG B:SER583 3.5 38.0 1.0
CB C:SER583 3.8 24.2 1.0
CB B:SER583 3.9 24.8 1.0
CA B:SER583 3.9 21.4 1.0
CA A:SER583 3.9 22.8 1.0
CB A:SER583 3.9 25.9 1.0
CA C:SER583 4.0 20.1 1.0
CB A:ASN586 4.1 24.2 1.0
CB C:ASN586 4.1 26.1 1.0
CB B:ASN586 4.1 22.8 1.0
CG B:ASN586 4.2 21.0 1.0
CG C:ASN586 4.2 25.9 1.0
CG A:ASN586 4.2 24.4 1.0
O A:SER583 4.4 21.7 1.0
O B:SER583 4.5 23.2 1.0
O C:SER583 4.5 23.6 1.0
C A:SER583 4.7 24.0 1.0
C B:SER583 4.7 21.1 1.0
C C:SER583 4.8 24.5 1.0
N B:SER583 5.0 21.0 1.0
N A:SER583 5.0 24.5 1.0

Reference:

V.N.Malashkevich, B.J.Schneider, M.L.Mcnally, M.A.Milhollen, J.X.Pang, P.S.Kim. Core Structure of the Envelope Glycoprotein GP2 From Ebola Virus at 1.9-A Resolution. Proc.Natl.Acad.Sci.Usa V. 96 2662 1999.
ISSN: ISSN 0027-8424
PubMed: 10077567
DOI: 10.1073/PNAS.96.6.2662
Page generated: Sat Jul 20 06:47:29 2024

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