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Chlorine in PDB 2f6g: Benm Effector Binding Domain

Protein crystallography data

The structure of Benm Effector Binding Domain, PDB code: 2f6g was solved by T.Clark, S.Haddad, O.Ezezika, E.Neidle, C.Momany, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.32 / 1.91
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 64.412, 66.615, 116.549, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 23.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Benm Effector Binding Domain (pdb code 2f6g). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Benm Effector Binding Domain, PDB code: 2f6g:

Chlorine binding site 1 out of 1 in 2f6g

Go back to Chlorine Binding Sites List in 2f6g
Chlorine binding site 1 out of 1 in the Benm Effector Binding Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Benm Effector Binding Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl602

b:28.1
occ:1.00
O B:HOH610 3.0 23.9 1.0
N B:ARG163 3.3 14.7 1.0
NH1 B:ARG160 3.4 20.9 1.0
O B:HOH777 3.7 59.8 1.0
CG B:GLU162 3.7 15.8 1.0
CB B:ARG163 3.9 13.9 1.0
CA B:GLU162 4.0 15.3 1.0
CG B:ARG163 4.0 13.7 1.0
CB B:ALA245 4.0 8.3 1.0
C B:GLU162 4.1 14.9 1.0
CA B:ARG163 4.2 14.3 1.0
O B:HOH634 4.3 39.6 1.0
CB B:GLU162 4.4 15.3 1.0
CZ B:ARG160 4.6 18.1 1.0
CD B:ARG163 4.6 15.0 1.0
OE1 B:GLU162 4.7 20.8 1.0
CD B:GLU162 4.7 16.7 1.0
O B:ARG163 4.7 12.8 1.0
NH2 B:ARG160 4.8 19.7 1.0
O B:ASN161 4.9 16.2 1.0
O B:HOH828 4.9 58.4 1.0
C B:ARG163 5.0 13.3 1.0

Reference:

O.C.Ezezika, S.Haddad, T.J.Clark, E.L.Neidle, C.Momany. Distinct Effector-Binding Sites Enable Synergistic Transcriptional Activation By Benm, A Lysr-Type Regulator. J.Mol.Biol. V. 367 616 2007.
ISSN: ISSN 0022-2836
PubMed: 17291527
DOI: 10.1016/J.JMB.2006.09.090
Page generated: Thu Jul 10 22:03:54 2025

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