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Chlorine in PDB 2jlb: Xanthomonas Campestris Putative Ogt (XCC0866), Complex with Udp-Glcnac Phosphonate Analogue

Protein crystallography data

The structure of Xanthomonas Campestris Putative Ogt (XCC0866), Complex with Udp-Glcnac Phosphonate Analogue, PDB code: 2jlb was solved by A.W.Schuettelkopf, A.J.Clarke, D.M.F.Van Aalten, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.83 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 83.860, 100.527, 154.521, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 24.7

Other elements in 2jlb:

The structure of Xanthomonas Campestris Putative Ogt (XCC0866), Complex with Udp-Glcnac Phosphonate Analogue also contains other interesting chemical elements:

Manganese (Mn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Xanthomonas Campestris Putative Ogt (XCC0866), Complex with Udp-Glcnac Phosphonate Analogue (pdb code 2jlb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Xanthomonas Campestris Putative Ogt (XCC0866), Complex with Udp-Glcnac Phosphonate Analogue, PDB code: 2jlb:

Chlorine binding site 1 out of 1 in 2jlb

Go back to Chlorine Binding Sites List in 2jlb
Chlorine binding site 1 out of 1 in the Xanthomonas Campestris Putative Ogt (XCC0866), Complex with Udp-Glcnac Phosphonate Analogue


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Xanthomonas Campestris Putative Ogt (XCC0866), Complex with Udp-Glcnac Phosphonate Analogue within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1571

b:25.6
occ:1.00
MN B:MN1570 2.3 14.4 1.0
NE2 B:HIS277 3.4 20.3 1.0
CB B:HIS264 3.6 20.6 1.0
O B:HOH2070 3.7 21.3 1.0
ND1 B:HIS264 3.8 18.0 1.0
CA B:HIS264 3.8 20.7 1.0
CG B:HIS264 4.2 19.6 1.0
N B:ASP265 4.2 21.7 1.0
CE1 B:HIS277 4.2 18.7 1.0
O B:ASP265 4.2 22.4 1.0
CD2 B:HIS277 4.3 21.4 1.0
C B:HIS264 4.3 21.1 1.0
O B:HOH2035 4.4 21.7 1.0
C B:ASP265 4.8 22.3 1.0
CE1 B:HIS264 5.0 17.8 1.0

Reference:

A.J.Clarke, R.Hurtado-Guerrero, S.Pathak, A.W.Schuttelkopf, V.Borodkin, S.M.Shepherd, A.F.M.Ibrahim, D.M.F.Van Aalten. Structural Insights Into Mechanism and Specificity of O-Glcnac Transferase. Embo J. V. 27 2780 2008.
ISSN: ISSN 0261-4189
PubMed: 18818698
DOI: 10.1038/EMBOJ.2008.186
Page generated: Sat Jul 20 09:02:38 2024

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