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Chlorine in PDB 2nzj: The Crystal Structure of REM1 in Complex with Gdp

Protein crystallography data

The structure of The Crystal Structure of REM1 in Complex with Gdp, PDB code: 2nzj was solved by A.P.Turnbull, E.Papagrigoriou, E.Ugochukwu, J.M.Elkins, M.Soundararajan, X.Yang, F.Gorrec, C.Umeano, E.Salah, N.Burgess, C.Johansson, G.Berridge, O.Gileadi, J.Bray, B.Marsden, S.Watts, F.Von Delft, J.Weigelt, A.Edwards, C.H.Arrowsmith, M.Sundstrom, D.Doyle, Structural Genomics Consortium(Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.00 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 43.640, 102.284, 165.565, 90.00, 90.00, 90.00
R / Rfree (%) 22.5 / 28

Other elements in 2nzj:

The structure of The Crystal Structure of REM1 in Complex with Gdp also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of REM1 in Complex with Gdp (pdb code 2nzj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of REM1 in Complex with Gdp, PDB code: 2nzj:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2nzj

Go back to Chlorine Binding Sites List in 2nzj
Chlorine binding site 1 out of 2 in the The Crystal Structure of REM1 in Complex with Gdp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of REM1 in Complex with Gdp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl253

b:50.5
occ:1.00
NZ A:LYS196 3.2 25.3 1.0
OG A:SER162 3.2 9.3 1.0
CD A:LYS196 3.8 26.9 1.0
CE A:LYS196 3.8 26.3 1.0
CB A:SER162 3.8 9.9 1.0
CB A:ASP165 4.2 14.2 1.0
CB A:ALA164 4.3 12.7 1.0
O A:GLY90 4.5 21.7 1.0
C A:ALA164 4.8 13.0 1.0
O A:ALA164 4.9 13.0 1.0
N A:ASP165 4.9 13.7 1.0
CG A:LYS196 4.9 27.7 1.0
OD2 A:ASP165 4.9 20.1 1.0

Chlorine binding site 2 out of 2 in 2nzj

Go back to Chlorine Binding Sites List in 2nzj
Chlorine binding site 2 out of 2 in the The Crystal Structure of REM1 in Complex with Gdp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of REM1 in Complex with Gdp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl253

b:45.7
occ:1.00
OG B:SER162 3.2 8.8 1.0
NZ B:LYS196 3.2 25.5 1.0
CB B:SER162 3.7 9.6 1.0
CD B:LYS196 4.0 26.5 1.0
CB B:ASP165 4.0 14.1 1.0
CE B:LYS196 4.0 26.3 1.0
CB B:ALA164 4.3 12.6 1.0
O B:GLY90 4.5 21.7 1.0
C B:ALA164 4.6 13.0 1.0
N B:ASP165 4.7 13.7 1.0
O B:ALA164 4.8 12.9 1.0
CA B:ASP165 5.0 14.0 1.0
CG B:ASP165 5.0 17.0 1.0
CA B:ALA164 5.0 12.5 1.0

Reference:

A.P.Turnbull, E.Papagrigoriou, E.Ugochukwu, J.M.Elkins, M.Soundararajan, X.Yang, F.Gorrec, C.Umeano, E.Salah, N.Burgess, C.Johansson, G.Berridge, O.Gileadi, J.Bray, B.Marsden, S.Watts, F.Von Delft, J.Weigelt, A.Edwards, C.H.Arrowsmith, M.Sundstrom, D.Doyle. The Crystal Structure of REM1 in Complex with Gdp To Be Published.
Page generated: Sat Jul 20 09:16:49 2024

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