Atomistry » Chlorine » PDB 2nxw-2o9s » 2o6t
Atomistry »
  Chlorine »
    PDB 2nxw-2o9s »
      2o6t »

Chlorine in PDB 2o6t: Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221).

Protein crystallography data

The structure of Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221)., PDB code: 2o6t was solved by M.Chruszcz, K.D.Koclega, E.Evdokimova, M.Cymborowski, M.Kudritska, A.Savchenko, A.Edwards, W.Minor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.53 / 2.55
Space group P 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 58.924, 97.083, 191.377, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 24.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221). (pdb code 2o6t). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221)., PDB code: 2o6t:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 2o6t

Go back to Chlorine Binding Sites List in 2o6t
Chlorine binding site 1 out of 4 in the Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:60.9
occ:1.00
OD1 A:ASP41 3.3 32.3 1.0
ND2 A:ASN45 3.7 15.4 1.0
NE2 A:HIS118 3.9 16.6 1.0
OD2 A:ASP41 3.9 31.5 1.0
CG A:ASP41 3.9 26.8 1.0
CG2 A:VAL65 4.0 14.9 1.0
O A:GLY63 4.1 20.6 1.0
OD1 C:ASN33 4.2 26.0 1.0
OD1 A:ASN45 4.4 19.4 1.0
CG A:ASN45 4.5 17.3 1.0
O C:HOH153 4.6 24.3 1.0
CE1 A:HIS118 4.7 15.5 1.0
ND2 C:ASN32 4.8 21.4 1.0
CE2 C:TYR28 4.8 14.2 1.0
CD2 A:HIS118 4.8 14.0 1.0

Chlorine binding site 2 out of 4 in 2o6t

Go back to Chlorine Binding Sites List in 2o6t
Chlorine binding site 2 out of 4 in the Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221). within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl201

b:52.0
occ:1.00
O E:GLY63 3.4 21.1 1.0
NE2 E:HIS118 3.5 14.7 1.0
OD1 E:ASP41 3.6 31.6 1.0
ND2 E:ASN45 3.7 16.0 1.0
CG2 E:VAL65 3.9 13.8 1.0
O E:HOH211 4.0 29.8 1.0
CZ2 G:TRP22 4.1 12.5 1.0
CE2 G:TRP22 4.2 15.0 1.0
OD1 E:ASN45 4.2 20.5 1.0
CG E:ASN45 4.3 17.7 1.0
CG E:ASP41 4.3 26.7 1.0
CD2 E:HIS118 4.4 14.7 1.0
CE1 E:HIS118 4.4 14.3 1.0
OD2 E:ASP41 4.4 28.5 1.0
NE1 G:TRP22 4.4 13.8 1.0
C E:GLY63 4.5 20.9 1.0
CH2 G:TRP22 4.7 12.2 1.0
N E:VAL65 4.8 17.9 1.0
CD2 G:TRP22 4.9 12.9 1.0

Chlorine binding site 3 out of 4 in 2o6t

Go back to Chlorine Binding Sites List in 2o6t
Chlorine binding site 3 out of 4 in the Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221). within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cl201

b:63.3
occ:1.00
O G:GLY63 3.6 21.5 1.0
ND2 G:ASN45 3.6 16.3 1.0
OD1 G:ASP41 3.6 32.0 1.0
NE2 G:HIS118 3.8 14.3 1.0
CZ2 E:TRP22 3.9 13.9 1.0
CE2 E:TRP22 3.9 11.7 1.0
NE1 E:TRP22 4.0 12.6 1.0
O G:HOH225 4.1 26.1 1.0
OD2 G:ASP41 4.3 32.5 1.0
CG2 G:VAL65 4.3 15.7 1.0
OD1 G:ASN45 4.3 23.2 1.0
CG G:ASP41 4.3 26.6 1.0
CG G:ASN45 4.3 19.0 1.0
CH2 E:TRP22 4.6 14.5 1.0
CE1 G:HIS118 4.6 15.5 1.0
CD2 E:TRP22 4.6 12.1 1.0
CD1 E:TRP22 4.7 14.1 1.0
C G:GLY63 4.7 21.0 1.0
CD2 G:HIS118 4.8 16.3 1.0

Chlorine binding site 4 out of 4 in 2o6t

Go back to Chlorine Binding Sites List in 2o6t
Chlorine binding site 4 out of 4 in the Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221).


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the PA5185 Protein From Pseudomonas Aeruginosa Strain PAO1- Orthorhombic Form (P2221). within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Cl201

b:67.7
occ:1.00
ND2 K:ASN45 3.2 16.8 1.0
OD1 K:ASP41 3.2 30.9 1.0
NE2 K:HIS118 3.3 14.6 1.0
O K:GLY63 3.7 20.5 1.0
CG2 K:VAL65 3.7 15.0 1.0
O I:HOH152 4.0 38.4 1.0
CG K:ASN45 4.1 18.3 1.0
CG K:ASP41 4.1 25.4 1.0
OD1 K:ASN45 4.1 19.7 1.0
CD2 K:HIS118 4.2 11.7 1.0
CE1 K:HIS118 4.2 12.0 1.0
OD2 K:ASP41 4.2 30.4 1.0
C K:GLY63 4.7 19.4 1.0
OD1 I:ASN33 4.7 23.7 1.0
N K:VAL65 4.8 17.9 1.0
CE2 I:TYR28 4.8 13.1 1.0
CB K:VAL65 5.0 16.9 1.0

Reference:

M.Chruszcz, M.D.Zimmerman, S.Wang, K.D.Koclega, H.Zheng, E.Evdokimova, M.Kudritska, M.Cymborowski, A.Savchenko, A.Edwards, W.Minor. Function-Biased Choice of Additives For Optimization of Protein Crystallization - the Case of the Putative Thioesterase PA5185 From Pseudomonas Aeruginosa PAO1. Cryst.Growth Des. V. 8 4054 2008.
ISSN: ISSN 1528-7483
PubMed: 19898606
DOI: 10.1021/CG800430F
Page generated: Thu Jul 10 23:27:05 2025

Last articles

Mg in 5QK6
Mg in 5QK5
Mg in 5QK4
Mg in 5QK2
Mg in 5QK3
Mg in 5QK1
Mg in 5QK0
Mg in 5QJZ
Mg in 5QJY
Mg in 5QJX
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy