Atomistry » Chlorine » PDB 2qio-2qu5 » 2qjv
Atomistry »
  Chlorine »
    PDB 2qio-2qu5 »
      2qjv »

Chlorine in PDB 2qjv: Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution

Protein crystallography data

The structure of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution, PDB code: 2qjv was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.51 / 1.90
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 200.140, 200.140, 200.140, 90.00, 90.00, 90.00
R / Rfree (%) 16 / 18.1

Other elements in 2qjv:

The structure of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution also contains other interesting chemical elements:

Nickel (Ni) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution (pdb code 2qjv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution, PDB code: 2qjv:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 2qjv

Go back to Chlorine Binding Sites List in 2qjv
Chlorine binding site 1 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl272

b:62.6
occ:1.00
O A:HOH383 2.9 35.1 1.0
NE A:ARG252 3.1 71.4 1.0
N A:GLY178 3.1 43.8 1.0
O A:HOH522 3.5 48.6 1.0
CD A:ARG252 3.7 58.4 1.0
CA A:GLY178 3.8 45.2 1.0
CZ A:ARG252 3.9 76.8 1.0
CD2 A:LEU248 4.0 41.2 1.0
NH2 A:ARG252 4.0 76.5 1.0
CA A:GLU177 4.1 44.9 1.0
C A:GLU177 4.1 42.7 1.0
CG2 A:THR181 4.4 35.2 1.0
O A:VAL176 4.5 35.5 1.0
C A:GLY178 4.6 44.9 1.0
O A:HOH636 4.6 61.7 1.0
O A:GLU180 4.6 31.8 1.0
N A:GLN179 4.6 41.0 1.0
CG A:GLU177 4.8 51.9 1.0
O A:HOH535 4.9 49.4 1.0
CG A:ARG252 4.9 44.1 1.0
N A:GLU177 4.9 40.7 1.0
NH1 A:ARG252 5.0 83.1 1.0

Chlorine binding site 2 out of 7 in 2qjv

Go back to Chlorine Binding Sites List in 2qjv
Chlorine binding site 2 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl273

b:69.8
occ:1.00
O A:HOH614 3.4 57.4 1.0
O A:HOH540 3.9 49.9 1.0
OH A:TYR84 3.9 44.5 1.0
O A:HOH455 4.1 42.4 1.0
CE2 A:TYR84 4.4 40.2 1.0
CZ A:TYR84 4.4 44.3 1.0
O A:ARG70 4.5 36.4 0.5
O A:ARG70 4.6 36.8 0.5
CG2 A:ILE71 4.8 35.6 1.0
CA A:ILE71 4.9 37.2 1.0

Chlorine binding site 3 out of 7 in 2qjv

Go back to Chlorine Binding Sites List in 2qjv
Chlorine binding site 3 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl274

b:50.1
occ:1.00
NH1 A:ARG137 2.8 73.3 1.0
NE A:ARG130 3.1 49.6 0.5
N A:SER166 3.2 39.0 1.0
NH2 A:ARG130 3.2 44.2 0.5
CZ A:ARG130 3.5 55.8 0.5
CZ A:ARG137 3.6 70.9 1.0
CD A:ARG137 3.7 68.6 1.0
CA A:SER166 3.8 40.5 1.0
NE A:ARG137 3.9 68.2 1.0
CB A:SER165 4.1 37.6 1.0
OH A:TYR240 4.1 40.4 1.0
C A:SER165 4.2 37.6 1.0
CD A:ARG130 4.3 51.8 0.5
CA A:SER165 4.3 39.0 1.0
NH1 A:ARG130 4.3 63.7 0.5
CD A:ARG130 4.4 61.3 0.5
OG A:SER166 4.4 44.2 1.0
CG1 A:VAL157 4.5 28.6 1.0
NH2 A:ARG137 4.6 74.6 1.0
O A:HOH429 4.6 39.5 1.0
N A:TRP167 4.6 36.7 1.0
CG A:ARG130 4.7 53.1 0.5
NH1 A:ARG130 4.8 61.4 0.5
CB A:SER166 4.8 41.3 1.0
C A:SER166 4.8 37.5 1.0
CG A:ARG137 4.9 55.2 1.0
CG2 A:VAL157 4.9 33.2 1.0
OG A:SER165 5.0 39.1 1.0

Chlorine binding site 4 out of 7 in 2qjv

Go back to Chlorine Binding Sites List in 2qjv
Chlorine binding site 4 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl275

b:41.8
occ:1.00
O A:HOH308 2.9 25.7 1.0
OG A:SER66 3.0 43.1 1.0
N A:ASP65 3.2 37.5 1.0
CB A:ALA64 3.6 37.2 1.0
N A:SER66 3.7 37.8 1.0
CB A:ASP65 3.8 36.8 1.0
CA A:ASP65 3.8 36.9 1.0
CB A:SER66 3.8 39.3 1.0
C A:ASP65 3.8 36.5 1.0
O A:ALA63 4.1 35.7 1.0
C A:ALA64 4.3 38.9 1.0
CB A:VAL117 4.3 37.8 1.0
CA A:SER66 4.3 39.1 1.0
CA A:ALA64 4.5 37.6 1.0
OD2 A:ASP65 4.5 59.0 1.0
O A:HOH380 4.6 35.0 1.0
CG2 A:VAL117 4.6 32.2 1.0
CG A:ASP65 4.6 44.6 1.0
O A:ASP65 4.7 34.1 1.0
O A:HOH577 4.8 52.6 1.0
O A:HOH377 5.0 34.8 1.0
CG1 A:VAL117 5.0 34.1 1.0
O A:HOH603 5.0 55.5 1.0

Chlorine binding site 5 out of 7 in 2qjv

Go back to Chlorine Binding Sites List in 2qjv
Chlorine binding site 5 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl272

b:65.7
occ:1.00
N B:GLU47 3.3 38.5 1.0
CB B:GLU47 3.6 41.1 1.0
CB B:ASP46 3.6 39.0 1.0
CG B:GLU47 3.9 50.6 1.0
CA B:GLU47 3.9 38.8 1.0
CG B:ASP46 4.0 39.5 1.0
OD2 B:ASP46 4.2 42.3 1.0
C B:GLU47 4.3 37.9 1.0
CG B:ARG48 4.3 47.4 1.0
C B:ASP46 4.3 40.2 1.0
N B:ARG48 4.4 38.3 1.0
CA B:ASP46 4.5 41.8 1.0
CD B:ARG48 4.5 48.4 1.0
OD1 B:ASP46 4.5 42.3 1.0
O B:HOH447 4.8 41.7 1.0
O B:HOH352 4.9 32.3 1.0
O B:GLU47 4.9 39.4 1.0

Chlorine binding site 6 out of 7 in 2qjv

Go back to Chlorine Binding Sites List in 2qjv
Chlorine binding site 6 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl273

b:54.4
occ:1.00
NH1 B:ARG137 2.9 77.5 1.0
N B:SER166 3.1 38.0 1.0
CD B:ARG137 3.5 66.4 1.0
CA B:SER166 3.7 39.2 1.0
CZ B:ARG137 3.7 75.0 1.0
NH2 B:ARG130 3.7 75.9 1.0
NE B:ARG137 3.9 68.2 1.0
OH B:TYR240 4.0 38.0 1.0
CB B:SER165 4.0 38.4 1.0
NE B:ARG130 4.2 71.5 1.0
C B:SER165 4.2 38.2 1.0
CA B:SER165 4.3 38.5 1.0
OG B:SER166 4.3 39.9 1.0
CG1 B:VAL157 4.4 32.9 1.0
CZ B:ARG130 4.5 77.4 1.0
O B:HOH373 4.5 34.6 1.0
N B:TRP167 4.6 36.8 1.0
O B:HOH577 4.6 55.2 1.0
CG B:ARG137 4.7 52.9 1.0
CB B:SER166 4.7 41.7 1.0
C B:SER166 4.7 37.4 1.0
NH2 B:ARG137 4.8 74.3 1.0
OG B:SER165 4.9 41.1 1.0
CG2 B:VAL157 4.9 35.0 1.0

Chlorine binding site 7 out of 7 in 2qjv

Go back to Chlorine Binding Sites List in 2qjv
Chlorine binding site 7 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl274

b:60.5
occ:1.00
O B:HOH386 2.9 35.4 1.0
N B:GLY178 3.0 42.5 1.0
NE B:ARG252 3.2 66.5 1.0
CD B:ARG252 3.7 48.0 1.0
CA B:GLY178 3.8 42.3 1.0
CA B:GLU177 3.9 43.8 1.0
C B:GLU177 4.0 40.6 1.0
CZ B:ARG252 4.1 76.4 1.0
CD2 B:LEU248 4.1 40.2 1.0
NH2 B:ARG252 4.2 77.4 1.0
O B:VAL176 4.5 36.8 1.0
O B:HOH575 4.5 54.5 1.0
CG2 B:THR181 4.5 36.5 1.0
C B:GLY178 4.6 43.3 1.0
CG B:GLU177 4.6 46.4 1.0
N B:GLN179 4.7 40.2 0.5
O B:GLU180 4.7 31.2 1.0
N B:GLN179 4.7 41.2 0.5
N B:GLU177 4.8 40.4 1.0
CB B:GLU177 4.9 43.5 1.0
CG B:ARG252 4.9 44.0 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 00:12:30 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy