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Chlorine in PDB 2qjv: Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution

Protein crystallography data

The structure of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution, PDB code: 2qjv was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.51 / 1.90
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 200.140, 200.140, 200.140, 90.00, 90.00, 90.00
R / Rfree (%) 16 / 18.1

Other elements in 2qjv:

The structure of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution also contains other interesting chemical elements:

Nickel (Ni) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution (pdb code 2qjv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution, PDB code: 2qjv:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 2qjv

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Chlorine binding site 1 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl272

b:62.6
occ:1.00
O A:HOH383 2.9 35.1 1.0
NE A:ARG252 3.1 71.4 1.0
N A:GLY178 3.1 43.8 1.0
O A:HOH522 3.5 48.6 1.0
CD A:ARG252 3.7 58.4 1.0
CA A:GLY178 3.8 45.2 1.0
CZ A:ARG252 3.9 76.8 1.0
CD2 A:LEU248 4.0 41.2 1.0
NH2 A:ARG252 4.0 76.5 1.0
CA A:GLU177 4.1 44.9 1.0
C A:GLU177 4.1 42.7 1.0
CG2 A:THR181 4.4 35.2 1.0
O A:VAL176 4.5 35.5 1.0
C A:GLY178 4.6 44.9 1.0
O A:HOH636 4.6 61.7 1.0
O A:GLU180 4.6 31.8 1.0
N A:GLN179 4.6 41.0 1.0
CG A:GLU177 4.8 51.9 1.0
O A:HOH535 4.9 49.4 1.0
CG A:ARG252 4.9 44.1 1.0
N A:GLU177 4.9 40.7 1.0
NH1 A:ARG252 5.0 83.1 1.0

Chlorine binding site 2 out of 7 in 2qjv

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Chlorine binding site 2 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl273

b:69.8
occ:1.00
O A:HOH614 3.4 57.4 1.0
O A:HOH540 3.9 49.9 1.0
OH A:TYR84 3.9 44.5 1.0
O A:HOH455 4.1 42.4 1.0
CE2 A:TYR84 4.4 40.2 1.0
CZ A:TYR84 4.4 44.3 1.0
O A:ARG70 4.5 36.4 0.5
O A:ARG70 4.6 36.8 0.5
CG2 A:ILE71 4.8 35.6 1.0
CA A:ILE71 4.9 37.2 1.0

Chlorine binding site 3 out of 7 in 2qjv

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Chlorine binding site 3 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl274

b:50.1
occ:1.00
NH1 A:ARG137 2.8 73.3 1.0
NE A:ARG130 3.1 49.6 0.5
N A:SER166 3.2 39.0 1.0
NH2 A:ARG130 3.2 44.2 0.5
CZ A:ARG130 3.5 55.8 0.5
CZ A:ARG137 3.6 70.9 1.0
CD A:ARG137 3.7 68.6 1.0
CA A:SER166 3.8 40.5 1.0
NE A:ARG137 3.9 68.2 1.0
CB A:SER165 4.1 37.6 1.0
OH A:TYR240 4.1 40.4 1.0
C A:SER165 4.2 37.6 1.0
CD A:ARG130 4.3 51.8 0.5
CA A:SER165 4.3 39.0 1.0
NH1 A:ARG130 4.3 63.7 0.5
CD A:ARG130 4.4 61.3 0.5
OG A:SER166 4.4 44.2 1.0
CG1 A:VAL157 4.5 28.6 1.0
NH2 A:ARG137 4.6 74.6 1.0
O A:HOH429 4.6 39.5 1.0
N A:TRP167 4.6 36.7 1.0
CG A:ARG130 4.7 53.1 0.5
NH1 A:ARG130 4.8 61.4 0.5
CB A:SER166 4.8 41.3 1.0
C A:SER166 4.8 37.5 1.0
CG A:ARG137 4.9 55.2 1.0
CG2 A:VAL157 4.9 33.2 1.0
OG A:SER165 5.0 39.1 1.0

Chlorine binding site 4 out of 7 in 2qjv

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Chlorine binding site 4 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl275

b:41.8
occ:1.00
O A:HOH308 2.9 25.7 1.0
OG A:SER66 3.0 43.1 1.0
N A:ASP65 3.2 37.5 1.0
CB A:ALA64 3.6 37.2 1.0
N A:SER66 3.7 37.8 1.0
CB A:ASP65 3.8 36.8 1.0
CA A:ASP65 3.8 36.9 1.0
CB A:SER66 3.8 39.3 1.0
C A:ASP65 3.8 36.5 1.0
O A:ALA63 4.1 35.7 1.0
C A:ALA64 4.3 38.9 1.0
CB A:VAL117 4.3 37.8 1.0
CA A:SER66 4.3 39.1 1.0
CA A:ALA64 4.5 37.6 1.0
OD2 A:ASP65 4.5 59.0 1.0
O A:HOH380 4.6 35.0 1.0
CG2 A:VAL117 4.6 32.2 1.0
CG A:ASP65 4.6 44.6 1.0
O A:ASP65 4.7 34.1 1.0
O A:HOH577 4.8 52.6 1.0
O A:HOH377 5.0 34.8 1.0
CG1 A:VAL117 5.0 34.1 1.0
O A:HOH603 5.0 55.5 1.0

Chlorine binding site 5 out of 7 in 2qjv

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Chlorine binding site 5 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl272

b:65.7
occ:1.00
N B:GLU47 3.3 38.5 1.0
CB B:GLU47 3.6 41.1 1.0
CB B:ASP46 3.6 39.0 1.0
CG B:GLU47 3.9 50.6 1.0
CA B:GLU47 3.9 38.8 1.0
CG B:ASP46 4.0 39.5 1.0
OD2 B:ASP46 4.2 42.3 1.0
C B:GLU47 4.3 37.9 1.0
CG B:ARG48 4.3 47.4 1.0
C B:ASP46 4.3 40.2 1.0
N B:ARG48 4.4 38.3 1.0
CA B:ASP46 4.5 41.8 1.0
CD B:ARG48 4.5 48.4 1.0
OD1 B:ASP46 4.5 42.3 1.0
O B:HOH447 4.8 41.7 1.0
O B:HOH352 4.9 32.3 1.0
O B:GLU47 4.9 39.4 1.0

Chlorine binding site 6 out of 7 in 2qjv

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Chlorine binding site 6 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl273

b:54.4
occ:1.00
NH1 B:ARG137 2.9 77.5 1.0
N B:SER166 3.1 38.0 1.0
CD B:ARG137 3.5 66.4 1.0
CA B:SER166 3.7 39.2 1.0
CZ B:ARG137 3.7 75.0 1.0
NH2 B:ARG130 3.7 75.9 1.0
NE B:ARG137 3.9 68.2 1.0
OH B:TYR240 4.0 38.0 1.0
CB B:SER165 4.0 38.4 1.0
NE B:ARG130 4.2 71.5 1.0
C B:SER165 4.2 38.2 1.0
CA B:SER165 4.3 38.5 1.0
OG B:SER166 4.3 39.9 1.0
CG1 B:VAL157 4.4 32.9 1.0
CZ B:ARG130 4.5 77.4 1.0
O B:HOH373 4.5 34.6 1.0
N B:TRP167 4.6 36.8 1.0
O B:HOH577 4.6 55.2 1.0
CG B:ARG137 4.7 52.9 1.0
CB B:SER166 4.7 41.7 1.0
C B:SER166 4.7 37.4 1.0
NH2 B:ARG137 4.8 74.3 1.0
OG B:SER165 4.9 41.1 1.0
CG2 B:VAL157 4.9 35.0 1.0

Chlorine binding site 7 out of 7 in 2qjv

Go back to Chlorine Binding Sites List in 2qjv
Chlorine binding site 7 out of 7 in the Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of An Iolb-Like Protein (STM4420) From Salmonella Typhimurium LT2 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl274

b:60.5
occ:1.00
O B:HOH386 2.9 35.4 1.0
N B:GLY178 3.0 42.5 1.0
NE B:ARG252 3.2 66.5 1.0
CD B:ARG252 3.7 48.0 1.0
CA B:GLY178 3.8 42.3 1.0
CA B:GLU177 3.9 43.8 1.0
C B:GLU177 4.0 40.6 1.0
CZ B:ARG252 4.1 76.4 1.0
CD2 B:LEU248 4.1 40.2 1.0
NH2 B:ARG252 4.2 77.4 1.0
O B:VAL176 4.5 36.8 1.0
O B:HOH575 4.5 54.5 1.0
CG2 B:THR181 4.5 36.5 1.0
C B:GLY178 4.6 43.3 1.0
CG B:GLU177 4.6 46.4 1.0
N B:GLN179 4.7 40.2 0.5
O B:GLU180 4.7 31.2 1.0
N B:GLN179 4.7 41.2 0.5
N B:GLU177 4.8 40.4 1.0
CB B:GLU177 4.9 43.5 1.0
CG B:ARG252 4.9 44.0 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 00:12:30 2025

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