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Chlorine in PDB 2qkq: Structure of the Sam Domain of Human Ephrin Type-B Receptor 4

Enzymatic activity of Structure of the Sam Domain of Human Ephrin Type-B Receptor 4

All present enzymatic activity of Structure of the Sam Domain of Human Ephrin Type-B Receptor 4:
2.7.10.1;

Protein crystallography data

The structure of Structure of the Sam Domain of Human Ephrin Type-B Receptor 4, PDB code: 2qkq was solved by J.R.Walker, D.Cuerrier, C.Butler-Cole, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe-Paganon, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.79 / 2.10
Space group P 42
Cell size a, b, c (Å), α, β, γ (°) 73.566, 73.566, 25.679, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 24.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Sam Domain of Human Ephrin Type-B Receptor 4 (pdb code 2qkq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of the Sam Domain of Human Ephrin Type-B Receptor 4, PDB code: 2qkq:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2qkq

Go back to Chlorine Binding Sites List in 2qkq
Chlorine binding site 1 out of 2 in the Structure of the Sam Domain of Human Ephrin Type-B Receptor 4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Sam Domain of Human Ephrin Type-B Receptor 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2

b:65.4
occ:1.00
NH2 A:ARG917 2.8 63.6 1.0
OG A:SER911 3.7 58.8 1.0
CZ A:ARG917 3.9 60.7 1.0
NH1 A:ARG917 4.2 59.6 1.0
CE B:LYS920 4.4 65.6 1.0
NZ B:LYS920 4.5 73.8 1.0
OE2 A:GLU925 4.6 64.0 1.0
CB A:SER911 4.7 64.7 1.0
CA A:GLY913 4.7 48.7 1.0
N A:GLU914 4.9 44.0 1.0

Chlorine binding site 2 out of 2 in 2qkq

Go back to Chlorine Binding Sites List in 2qkq
Chlorine binding site 2 out of 2 in the Structure of the Sam Domain of Human Ephrin Type-B Receptor 4


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Sam Domain of Human Ephrin Type-B Receptor 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1

b:66.8
occ:1.00
NZ A:LYS920 3.7 77.9 1.0
OG B:SER911 3.7 58.2 1.0
NH1 B:ARG917 3.8 48.7 1.0
NH2 B:ARG917 4.0 49.1 1.0
CZ B:ARG917 4.3 49.8 1.0
CB B:SER911 4.6 60.1 1.0
CA B:GLY913 4.6 51.7 1.0
OE2 B:GLU925 4.6 62.2 1.0
N B:GLU914 4.9 47.9 1.0
CE A:LYS920 4.9 74.4 1.0

Reference:

J.R.Walker, D.Cuerrier, C.Butler-Cole, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe-Paganon. Sam Domain of Human Ephrin Type-B Receptor 4 (EPHB4) To Be Published.
Page generated: Fri Jul 11 00:14:22 2025

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