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Chlorine in PDB 2rcd: Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution, PDB code: 2rcd was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.46 / 2.32
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 93.375, 93.524, 72.919, 90.00, 105.32, 90.00
R / Rfree (%) 18.7 / 24.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution (pdb code 2rcd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution, PDB code: 2rcd:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 2rcd

Go back to Chlorine Binding Sites List in 2rcd
Chlorine binding site 1 out of 4 in the Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl129

b:50.3
occ:1.00
O A:HOH147 2.8 51.2 1.0
N A:GLU57 3.3 50.0 1.0
N A:ILE56 3.4 49.9 1.0
CB A:GLU57 3.5 52.8 1.0
CA A:GLY55 3.6 46.9 1.0
C A:GLY55 3.8 49.5 1.0
CA A:GLU42 3.8 47.8 1.0
CG2 A:ILE56 3.9 40.9 1.0
CA A:GLU57 4.0 54.0 1.0
CB A:GLU42 4.2 52.1 1.0
O A:ASP41 4.3 43.6 1.0
C A:ILE56 4.3 50.3 1.0
CA A:ILE56 4.3 49.0 1.0
N A:GLU42 4.3 45.9 1.0
C A:ASP41 4.5 44.4 1.0
O A:HOH144 4.6 55.6 1.0
O A:GLY55 4.6 52.2 1.0
CB A:ILE56 4.6 48.2 1.0
CG A:GLU57 4.8 60.0 1.0
OE1 A:GLU57 4.8 71.1 1.0
O A:TYR54 4.9 51.9 1.0
C A:GLU42 4.9 48.0 1.0
N A:GLY55 4.9 48.0 1.0
O A:GLU42 5.0 49.9 1.0

Chlorine binding site 2 out of 4 in 2rcd

Go back to Chlorine Binding Sites List in 2rcd
Chlorine binding site 2 out of 4 in the Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl129

b:55.7
occ:1.00
O B:HOH145 2.7 60.5 1.0
N B:GLU57 3.3 51.2 1.0
N B:ILE56 3.4 48.3 1.0
CB B:GLU57 3.6 51.5 1.0
CA B:GLY55 3.7 48.0 1.0
C B:GLY55 3.8 48.1 1.0
CA B:GLU42 3.8 47.1 1.0
CG2 B:ILE56 3.9 37.9 1.0
CA B:GLU57 4.1 53.3 1.0
CB B:GLU42 4.2 50.0 1.0
CA B:ILE56 4.3 48.9 1.0
C B:ILE56 4.3 49.6 1.0
N B:GLU42 4.3 46.1 1.0
O B:ASP41 4.3 44.9 1.0
OE1 B:GLU57 4.4 59.0 1.0
C B:ASP41 4.6 44.3 1.0
CB B:ILE56 4.7 49.5 1.0
O B:GLY55 4.7 48.7 1.0
CG B:GLU57 4.8 60.5 1.0
C B:GLU42 4.9 47.1 1.0
O B:TYR54 4.9 48.8 1.0

Chlorine binding site 3 out of 4 in 2rcd

Go back to Chlorine Binding Sites List in 2rcd
Chlorine binding site 3 out of 4 in the Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl129

b:51.4
occ:1.00
N C:GLU57 3.4 49.6 1.0
N C:ILE56 3.4 47.5 1.0
CA C:GLY55 3.6 48.3 1.0
CB C:GLU57 3.6 51.9 1.0
CA C:GLU42 3.7 47.7 1.0
C C:GLY55 3.7 49.2 1.0
CG2 C:ILE56 3.9 41.4 1.0
CA C:GLU57 4.1 54.3 1.0
N C:GLU42 4.2 46.2 1.0
CA C:ILE56 4.3 48.6 1.0
CB C:GLU42 4.3 49.3 1.0
C C:ILE56 4.3 50.1 1.0
O C:ASP41 4.3 43.9 1.0
C C:ASP41 4.5 44.1 1.0
OE1 C:GLU57 4.5 78.5 1.0
CB C:ILE56 4.7 46.8 1.0
O C:GLY55 4.7 51.8 1.0
C C:GLU42 4.8 48.5 1.0
O C:GLU42 4.9 49.4 1.0
N C:GLY55 4.9 47.2 1.0
CG C:GLU57 4.9 63.1 1.0
O C:TYR54 4.9 47.7 1.0

Chlorine binding site 4 out of 4 in 2rcd

Go back to Chlorine Binding Sites List in 2rcd
Chlorine binding site 4 out of 4 in the Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Protein with Unknown Function From DUF3225 Family (ECA3500) From Pectobacterium Atrosepticum SCRI1043 at 2.32 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl129

b:55.0
occ:1.00
N D:GLU57 3.3 50.4 1.0
N D:ILE56 3.4 48.3 1.0
CA D:GLY55 3.6 48.3 1.0
CB D:GLU57 3.6 52.7 1.0
CA D:GLU42 3.7 47.8 1.0
C D:GLY55 3.8 47.6 1.0
CG2 D:ILE56 3.9 43.2 1.0
CA D:GLU57 4.1 52.6 1.0
CB D:GLU42 4.2 50.9 1.0
N D:GLU42 4.2 46.8 1.0
C D:ILE56 4.3 50.1 1.0
CA D:ILE56 4.3 48.2 1.0
O D:ASP41 4.4 46.0 1.0
C D:ASP41 4.6 46.4 1.0
CB D:ILE56 4.6 47.5 1.0
O D:GLY55 4.7 48.3 1.0
C D:GLU42 4.8 47.6 1.0
O D:GLU42 4.8 48.1 1.0
N D:GLU58 4.9 53.6 1.0
N D:GLY55 5.0 48.8 1.0
O D:TYR54 5.0 48.3 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 00:28:55 2025

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