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Chlorine in PDB 2vb9: Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure

Enzymatic activity of Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure

All present enzymatic activity of Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure:
2.3.1.41;

Protein crystallography data

The structure of Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure, PDB code: 2vb9 was solved by G.Pappenberger, T.Schulz-Gasch, J.Bailly, M.Hennig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 115.47 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.914, 138.355, 211.914, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 23.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure (pdb code 2vb9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure, PDB code: 2vb9:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2vb9

Go back to Chlorine Binding Sites List in 2vb9
Chlorine binding site 1 out of 2 in the Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1405

b:68.7
occ:1.00
O A:HOH2497 3.0 46.9 1.0
NH2 A:ARG27 3.1 30.5 1.0
ND1 A:HIS352 3.4 24.4 1.0
NH1 A:ARG27 3.9 31.1 1.0
O A:HOH2500 3.9 45.6 1.0
CZ A:ARG27 4.0 29.0 1.0
CE1 A:HIS352 4.2 26.3 1.0
CG A:HIS352 4.4 25.2 1.0
CB A:HIS352 4.6 23.4 1.0
CD2 A:LEU23 5.0 22.5 1.0

Chlorine binding site 2 out of 2 in 2vb9

Go back to Chlorine Binding Sites List in 2vb9
Chlorine binding site 2 out of 2 in the Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1405

b:40.9
occ:1.00
O B:HOH2096 2.8 55.3 1.0
ND1 B:HIS352 3.2 14.2 1.0
O B:HOH2531 3.6 37.7 1.0
NH2 B:ARG27 3.6 20.7 1.0
NH1 B:ARG27 3.8 20.6 1.0
CE1 B:HIS352 3.9 15.3 1.0
CZ B:ARG27 4.2 19.7 1.0
CG B:HIS352 4.3 13.2 1.0
CB B:HIS352 4.6 13.1 1.0
O B:HOH2529 4.7 42.6 1.0
O B:HOH2095 4.7 31.1 1.0
O B:HOH2014 4.9 49.6 1.0

Reference:

G.Pappenberger, T.Schulz-Gasch, E.Kusznir, F.Mueller, M.Hennig. Structure-Assisted Discovery of An Aminothiazole Derivative As A Lead Molecule For Inhibition of Bacterial Fatty-Acid Synthesis. Acta Crystallogr.,Sect.D V. 63 1208 2007.
ISSN: ISSN 0907-4449
PubMed: 18084068
DOI: 10.1107/S0907444907049852
Page generated: Fri Jul 11 00:44:49 2025

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