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Chlorine in PDB 2vjj: Tailspike Protein of E.Coli Bacteriophage HK620 in Complex with Hexasaccharide

Protein crystallography data

The structure of Tailspike Protein of E.Coli Bacteriophage HK620 in Complex with Hexasaccharide, PDB code: 2vjj was solved by J.J.Mueller, S.Barbirz, C.Uetrecht, R.Seckler, U.Heinemann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.64 / 1.59
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 73.910, 73.910, 174.590, 90.00, 90.00, 120.00
R / Rfree (%) 13.3 / 16.5

Other elements in 2vjj:

The structure of Tailspike Protein of E.Coli Bacteriophage HK620 in Complex with Hexasaccharide also contains other interesting chemical elements:

Potassium (K) 1 atom
Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Tailspike Protein of E.Coli Bacteriophage HK620 in Complex with Hexasaccharide (pdb code 2vjj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Tailspike Protein of E.Coli Bacteriophage HK620 in Complex with Hexasaccharide, PDB code: 2vjj:

Chlorine binding site 1 out of 1 in 2vjj

Go back to Chlorine Binding Sites List in 2vjj
Chlorine binding site 1 out of 1 in the Tailspike Protein of E.Coli Bacteriophage HK620 in Complex with Hexasaccharide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Tailspike Protein of E.Coli Bacteriophage HK620 in Complex with Hexasaccharide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl711

b:8.6
occ:0.75
O A:HOH2591 3.1 23.2 1.0
N A:ASN625 3.1 7.5 1.0
CB A:ASN625 3.5 9.4 1.0
CA A:ASN625 3.5 7.0 1.0
CA A:SER596 3.5 4.4 1.0
CB A:SER596 3.6 5.3 1.0
C A:ASN625 3.6 7.3 1.0
N A:TYR597 3.6 6.1 1.0
CG2 A:VAL626 3.8 8.8 1.0
N A:ALA624 3.8 6.7 1.0
N A:VAL626 3.8 6.8 1.0
C A:GLY623 3.9 7.7 1.0
CA A:GLY623 4.0 9.0 1.0
ND2 A:ASN625 4.1 8.4 1.0
O A:ASN625 4.1 6.9 1.0
C A:SER596 4.1 7.8 1.0
C A:ALA624 4.3 7.5 1.0
CG A:ASN625 4.3 8.0 1.0
O A:LEU595 4.4 9.3 1.0
O A:GLY623 4.5 7.5 1.0
CD1 A:TYR597 4.5 8.6 1.0
CA A:ALA624 4.6 5.5 1.0
CE1 A:TYR597 4.7 9.1 1.0
CA A:TYR597 4.8 6.7 1.0
CA A:VAL626 4.8 8.4 1.0
N A:SER596 4.8 8.1 1.0
CB A:VAL626 4.8 10.3 1.0
OG A:SER596 4.9 7.7 1.0

Reference:

S.Barbirz, J.J.Mueller, C.Uetrecht, A.J.Clark, U.Heinemann, R.Seckler. Crystal Structure of Escherichia Coli Phage HK620 Tailspike: Podoviral Tailspike Endoglycosidase Modules Are Evolutionarily Related. Mol.Microbiol. V. 69 303 2008.
ISSN: ISSN 0950-382X
PubMed: 18547389
DOI: 10.1111/J.1365-2958.2008.06311.X
Page generated: Fri Jul 11 00:51:38 2025

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