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Chlorine in PDB 2vq8: Rnase Zf-1A

Protein crystallography data

The structure of Rnase Zf-1A, PDB code: 2vq8 was solved by K.Kazakou, D.E.Holloway, S.H.Prior, V.Subramanian, K.R.Acharya, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.24 / 1.35
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 33.155, 39.426, 46.126, 90.00, 98.80, 90.00
R / Rfree (%) 18.4 / 22.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Rnase Zf-1A (pdb code 2vq8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Rnase Zf-1A, PDB code: 2vq8:

Chlorine binding site 1 out of 1 in 2vq8

Go back to Chlorine Binding Sites List in 2vq8
Chlorine binding site 1 out of 1 in the Rnase Zf-1A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Rnase Zf-1A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1127

b:46.0
occ:1.00
OG A:SER69 2.5 13.0 0.7
NH1 A:ARG76 2.9 20.5 1.0
O A:ARG76 3.2 7.6 1.0
O A:SER77 3.2 8.5 1.0
OD1 A:ASN78 3.5 10.8 1.0
CB A:SER69 3.7 10.5 1.0
C A:SER77 3.7 8.3 1.0
CB A:ARG76 3.8 7.9 1.0
CG A:ARG76 3.8 10.0 1.0
C A:ARG76 3.8 7.4 1.0
CD A:ARG76 3.9 14.1 1.0
CA A:ASN78 4.0 10.1 1.0
OG A:SER69 4.0 9.4 0.3
O A:HOH2095 4.0 13.7 1.0
CZ A:ARG76 4.1 19.5 1.0
N A:ASN78 4.1 9.1 1.0
N A:SER69 4.3 8.8 1.0
CA A:ARG76 4.4 7.3 1.0
O A:HOH2094 4.4 20.3 1.0
NE A:ARG76 4.4 18.2 1.0
N A:SER77 4.5 7.5 1.0
CG A:ASN78 4.5 10.9 1.0
CA A:SER69 4.5 9.7 1.0
CA A:SER77 4.7 7.7 1.0
CB A:ASN78 4.8 10.6 1.0
O A:SER69 4.9 8.5 1.0
C A:ASN78 4.9 10.6 1.0

Reference:

K.Kazakou, D.E.Holloway, S.H.Prior, V.Subramanian, K.R.Acharya. Ribonuclease A Homologues of the Zebrafish: Polymorphism, Crystal Structures of Two Representatives and Their Evolutionary Implications. J.Mol.Biol. V. 380 206 2008.
ISSN: ISSN 0022-2836
PubMed: 18508078
DOI: 10.1016/J.JMB.2008.04.070
Page generated: Fri Jul 11 00:58:32 2025

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