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Chlorine in PDB 2vve: Crystal Structure of the Stem and Receptor Binding Domain of the Spike Protein P1 From Bacteriophage PM2

Protein crystallography data

The structure of Crystal Structure of the Stem and Receptor Binding Domain of the Spike Protein P1 From Bacteriophage PM2, PDB code: 2vve was solved by N.G.A.Abrescia, J.M.Grimes, H.K.Kivela, R.Assenberg, G.C.Sutton, S.J.Butcher, J.K.H.Bamford, D.H.Bamford, D.I.Stuart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.00 / 1.77
Space group P 4
Cell size a, b, c (Å), α, β, γ (°) 107.894, 107.894, 44.171, 90.00, 90.00, 90.00
R / Rfree (%) 17.3 / 22.6

Other elements in 2vve:

The structure of Crystal Structure of the Stem and Receptor Binding Domain of the Spike Protein P1 From Bacteriophage PM2 also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Stem and Receptor Binding Domain of the Spike Protein P1 From Bacteriophage PM2 (pdb code 2vve). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Stem and Receptor Binding Domain of the Spike Protein P1 From Bacteriophage PM2, PDB code: 2vve:

Chlorine binding site 1 out of 1 in 2vve

Go back to Chlorine Binding Sites List in 2vve
Chlorine binding site 1 out of 1 in the Crystal Structure of the Stem and Receptor Binding Domain of the Spike Protein P1 From Bacteriophage PM2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Stem and Receptor Binding Domain of the Spike Protein P1 From Bacteriophage PM2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1337

b:27.5
occ:1.00
NH1 A:ARG105 3.3 18.6 1.0
O A:HOH2023 3.4 22.9 1.0
CD A:ARG105 3.8 12.1 1.0
CG A:ARG105 4.1 13.9 1.0
CZ A:ARG105 4.3 23.9 1.0
CB A:ARG105 4.3 12.7 1.0
NE A:ARG105 4.4 17.5 1.0
O A:HOH2121 4.9 15.7 1.0

Reference:

N.G.A.Abrescia, J.M.Grimes, H.K.Kivela, R.Assenberg, G.C.Sutton, S.J.Butcher, J.K.H.Bamford, D.H.Bamford, D.I.Stuart. Insights Into Virus Evolution and Membrane Biogenesis From the Structure of the Marine Lipid- Containing Bacteriophage PM2. Mol.Cell V. 31 749 2008.
ISSN: ISSN 1097-2765
PubMed: 18775333
DOI: 10.1016/J.MOLCEL.2008.06.026
Page generated: Fri Jul 11 01:04:44 2025

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