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Chlorine in PDB 2wjq: Nanc Porin Structure in Hexagonal Crystal Form.

Protein crystallography data

The structure of Nanc Porin Structure in Hexagonal Crystal Form., PDB code: 2wjq was solved by C.Wirth, G.Condemine, T.Schirmer, C.M.Peneff, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.00
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 96.823, 96.823, 121.253, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 21.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Nanc Porin Structure in Hexagonal Crystal Form. (pdb code 2wjq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Nanc Porin Structure in Hexagonal Crystal Form., PDB code: 2wjq:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2wjq

Go back to Chlorine Binding Sites List in 2wjq
Chlorine binding site 1 out of 2 in the Nanc Porin Structure in Hexagonal Crystal Form.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Nanc Porin Structure in Hexagonal Crystal Form. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1216

b:33.9
occ:1.00
O A:HOH2102 3.0 36.4 1.0
ND2 A:ASN126 3.2 12.2 1.0
NE1 A:TRP110 3.2 14.8 1.0
CD A:ARG124 3.6 12.1 1.0
CD1 A:TRP110 3.8 15.4 1.0
NE A:ARG124 4.1 10.3 1.0
OH A:TYR108 4.4 18.6 1.0
CG A:ASN126 4.4 12.6 1.0
CE2 A:TRP110 4.5 15.9 1.0
CG A:ARG124 4.6 13.7 1.0
CB A:ARG124 4.6 12.0 1.0
OD1 A:ASN126 4.8 11.9 1.0

Chlorine binding site 2 out of 2 in 2wjq

Go back to Chlorine Binding Sites List in 2wjq
Chlorine binding site 2 out of 2 in the Nanc Porin Structure in Hexagonal Crystal Form.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Nanc Porin Structure in Hexagonal Crystal Form. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1217

b:35.0
occ:1.00
N A:LYS164 3.1 13.6 1.0
O A:HOH2109 3.4 44.9 1.0
NH1 A:ARG158 3.7 32.8 1.0
CA A:LYS163 3.7 14.4 1.0
CB A:LYS164 3.7 15.2 1.0
CB A:LYS163 3.8 14.5 1.0
C A:LYS163 3.9 13.6 1.0
CD1 A:TRP165 3.9 17.4 1.0
CA A:LYS164 4.0 14.7 1.0
NE1 A:TRP165 4.1 16.9 1.0
CG A:LYS163 4.3 16.9 1.0
CD A:LYS164 4.5 25.3 1.0
CG A:LYS164 4.6 21.8 1.0
N A:TRP165 4.8 12.7 1.0
CZ A:ARG158 4.8 31.4 1.0
C A:LYS164 4.8 13.0 1.0
O A:HIS162 5.0 15.2 1.0

Reference:

C.Wirth, G.Condemine, C.Boiteux, S.Berneche, T.Schirmer, C.M.Peneff. Nanc Crystal Structure, A Model For Outer Membrane Channels of the Acidic Sugar-Specific Kdgm Porin Family. J.Mol.Biol. V. 394 718 2009.
ISSN: ISSN 0022-2836
PubMed: 19796645
DOI: 10.1016/J.JMB.2009.09.054
Page generated: Sat Jul 20 12:58:52 2024

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