Atomistry » Chlorine » PDB 2wjq-2wpr » 2wk0
Atomistry »
  Chlorine »
    PDB 2wjq-2wpr »
      2wk0 »

Chlorine in PDB 2wk0: Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate.

Enzymatic activity of Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate.

All present enzymatic activity of Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate.:
3.5.2.6;

Protein crystallography data

The structure of Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate., PDB code: 2wk0 was solved by E.Sauvage, A.Zervosen, G.Dive, R.Herman, F.Kerff, A.Amoroso, E.Fonze, R.F.Pratt, A.Luxen, P.Charlier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 17.70 / 1.65
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 46.988, 104.479, 63.740, 90.00, 94.07, 90.00
R / Rfree (%) 18.89 / 21.14

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate. (pdb code 2wk0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate., PDB code: 2wk0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2wk0

Go back to Chlorine Binding Sites List in 2wk0
Chlorine binding site 1 out of 2 in the Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:14.5
occ:1.00
OG1 A:THR235 3.0 9.0 1.0
OG A:SER130 3.0 8.4 1.0
O A:HOH2167 3.1 22.5 1.0
C12 A:BIY300 3.4 11.1 1.0
O A:THR235 3.4 9.8 1.0
NZ A:LYS234 3.5 7.8 1.0
CB A:SER70 3.5 9.5 1.0
CB A:SER130 3.6 10.1 1.0
O14 A:BIY300 3.6 11.1 1.0
C A:THR235 3.7 9.1 1.0
OG A:SER70 3.7 9.0 1.0
C3 A:BIY300 3.8 11.6 1.0
CA A:GLY236 3.8 8.9 1.0
C11 A:BIY300 3.9 14.3 1.0
N A:GLY236 3.9 9.0 1.0
CB A:THR235 3.9 8.7 1.0
C2 A:BIY300 4.3 13.3 1.0
C A:GLY236 4.3 8.8 1.0
CA A:THR235 4.4 8.6 1.0
S4 A:BIY300 4.4 14.4 1.0
N A:ALA237 4.5 9.0 1.0
NH1 A:ARG244 4.7 11.0 1.0
O A:HOH2160 4.7 14.1 1.0
OG1 A:THR216 4.7 10.6 1.0
C5 A:BIY300 4.8 15.7 1.0
CA A:SER70 4.9 9.2 1.0
CE A:LYS234 4.9 9.1 1.0

Chlorine binding site 2 out of 2 in 2wk0

Go back to Chlorine Binding Sites List in 2wk0
Chlorine binding site 2 out of 2 in the Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Class A Beta-Lactamase BS3 Inhibited By 6-Beta-Iodopenicillanate. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:17.8
occ:1.00
OG B:SER130 3.0 16.3 1.0
OG1 B:THR235 3.0 14.9 1.0
O B:HOH2121 3.1 28.6 1.0
C12 B:BIY300 3.4 17.4 1.0
CB B:SER130 3.5 16.8 1.0
O B:THR235 3.6 15.0 1.0
O14 B:BIY300 3.6 17.2 1.0
NZ B:LYS234 3.6 14.0 1.0
CB B:SER70 3.6 9.4 1.0
OG B:SER70 3.6 10.4 1.0
C3 B:BIY300 3.7 19.4 1.0
C B:THR235 3.7 14.9 1.0
CB B:THR235 3.9 14.5 1.0
CA B:GLY236 3.9 14.6 1.0
N B:GLY236 4.0 14.8 1.0
C11 B:BIY300 4.1 22.4 1.0
C2 B:BIY300 4.1 22.4 1.0
S4 B:BIY300 4.4 19.4 1.0
CA B:THR235 4.4 14.6 1.0
C B:GLY236 4.5 14.6 1.0
N B:ALA237 4.6 14.9 1.0
OG1 B:THR216 4.7 15.3 1.0
NH1 B:ARG244 4.7 16.2 1.0
O B:HOH2114 4.8 19.9 1.0
C5 B:BIY300 4.9 21.7 1.0
N1 B:BIY300 4.9 21.9 1.0
CE B:LYS234 5.0 13.6 1.0

Reference:

E.Sauvage, A.Zervosen, G.Dive, R.Herman, A.Amoroso, B.Joris, E.Fonze, R.F.Pratt, A.Luxen, P.Charlier, F.Kerff. Structural Basis of the Inhibition of Class A Beta- Lactamases and Penicillin-Binding Proteins By 6- Beta-Iodopenicillanate. J.Am.Chem.Soc. V. 131 15262 2009.
ISSN: ISSN 0002-7863
PubMed: 19919161
DOI: 10.1021/JA9051526
Page generated: Fri Jul 11 01:28:53 2025

Last articles

Na in 3QEL
Na in 3QC5
Na in 3QB9
Na in 3QB5
Na in 3Q9F
Na in 3Q9E
Na in 3QAA
Na in 3Q9Z
Na in 3Q9C
Na in 3Q9B
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy