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Chlorine in PDB 2x64: Glutathione-S-Transferase From Xylella Fastidiosa

Protein crystallography data

The structure of Glutathione-S-Transferase From Xylella Fastidiosa, PDB code: 2x64 was solved by J.R.C.Muniz, N.C.Rodrigues, L.Bleicher, R.F.Travensolo, W.Garcia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.67 / 2.30
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 47.670, 87.890, 90.780, 116.53, 99.33, 94.49
R / Rfree (%) 16.67 / 21.91

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Glutathione-S-Transferase From Xylella Fastidiosa (pdb code 2x64). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Glutathione-S-Transferase From Xylella Fastidiosa, PDB code: 2x64:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 2x64

Go back to Chlorine Binding Sites List in 2x64
Chlorine binding site 1 out of 6 in the Glutathione-S-Transferase From Xylella Fastidiosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Glutathione-S-Transferase From Xylella Fastidiosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1206

b:60.1
occ:1.00
O B:HOH2029 2.9 44.9 1.0
CH2 A:TRP94 3.8 33.2 1.0
CZ2 A:TRP94 4.0 33.1 1.0
CZ3 A:TRP94 4.0 33.4 1.0
CE2 A:TRP94 4.2 33.9 1.0
O B:HOH2025 4.2 48.9 1.0
OG1 B:THR60 4.2 32.5 1.0
CE3 A:TRP94 4.2 32.5 1.0
CD1 A:PHE97 4.3 31.7 1.0
CB A:PHE97 4.3 28.9 1.0
CD2 A:TRP94 4.3 30.5 1.0
NE2 B:GLN61 4.3 21.2 1.0
O A:ARG93 4.4 30.5 1.0
CG A:PHE97 4.5 30.0 1.0
NE A:ARG93 4.6 42.1 1.0
CG B:GLN61 4.7 24.8 1.0
CG A:ARG93 4.7 29.5 1.0
O B:HOH2028 4.9 43.2 1.0
NE1 A:TRP94 4.9 33.0 1.0
C A:ARG93 4.9 32.3 1.0

Chlorine binding site 2 out of 6 in 2x64

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Chlorine binding site 2 out of 6 in the Glutathione-S-Transferase From Xylella Fastidiosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Glutathione-S-Transferase From Xylella Fastidiosa within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1206

b:66.6
occ:1.00
O D:HOH2030 2.9 33.4 1.0
O D:HOH2009 3.8 48.7 1.0
NE2 D:GLN61 3.9 25.8 1.0
OG1 D:THR60 4.0 36.9 1.0
O D:HOH2019 4.2 49.0 1.0
O C:ARG93 4.3 30.9 1.0
CZ2 C:TRP94 4.4 34.3 1.0
CH2 C:TRP94 4.4 35.7 1.0
CB C:PHE97 4.4 29.7 1.0
CG D:GLN61 4.4 25.6 1.0
CZ3 C:TRP94 4.5 33.5 1.0
CE2 C:TRP94 4.5 33.3 1.0
CD1 C:PHE97 4.5 36.8 1.0
O D:HOH2021 4.5 43.4 1.0
NE C:ARG93 4.6 34.2 1.0
CE3 C:TRP94 4.6 29.9 1.0
CD2 C:TRP94 4.6 28.3 1.0
CG C:ARG93 4.6 37.4 1.0
CD D:GLN61 4.7 34.4 1.0
CG C:PHE97 4.7 33.2 1.0
C C:ARG93 4.8 29.5 1.0
OG D:SER46 4.9 70.7 1.0

Chlorine binding site 3 out of 6 in 2x64

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Chlorine binding site 3 out of 6 in the Glutathione-S-Transferase From Xylella Fastidiosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Glutathione-S-Transferase From Xylella Fastidiosa within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl1206

b:73.7
occ:1.00
O C:HOH2036 2.8 34.8 1.0
O C:HOH2009 3.4 53.5 1.0
CG D:ARG93 3.6 23.2 1.0
NE D:ARG93 3.6 31.8 1.0
CE2 D:TRP94 3.7 29.5 1.0
CZ2 D:TRP94 3.8 30.1 1.0
CD2 D:TRP94 4.0 23.9 1.0
OG1 C:THR60 4.0 31.5 1.0
CH2 D:TRP94 4.0 30.7 1.0
CD D:ARG93 4.1 27.0 1.0
O D:ARG93 4.1 22.5 1.0
CE3 D:TRP94 4.2 26.2 1.0
NE1 D:TRP94 4.2 27.9 1.0
CZ3 D:TRP94 4.2 29.1 1.0
CB D:ARG93 4.2 20.9 1.0
C D:ARG93 4.3 24.1 1.0
CG C:GLN61 4.6 27.3 1.0
CZ D:ARG93 4.6 40.0 1.0
CG D:TRP94 4.6 23.1 1.0
CD1 D:TRP94 4.7 26.6 1.0
NE2 C:GLN61 4.7 18.8 1.0
O C:HOH2025 4.7 60.0 1.0
CB D:PHE97 4.7 23.3 1.0
N D:TRP94 4.8 21.5 1.0
NH2 D:ARG93 4.8 30.8 1.0
CA D:ARG93 4.9 21.9 1.0
O D:HOH2016 4.9 51.0 1.0

Chlorine binding site 4 out of 6 in 2x64

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Chlorine binding site 4 out of 6 in the Glutathione-S-Transferase From Xylella Fastidiosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Glutathione-S-Transferase From Xylella Fastidiosa within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl1206

b:64.8
occ:1.00
O F:HOH2018 2.9 45.2 1.0
CD E:ARG93 3.7 28.3 0.5
CG E:ARG93 3.9 30.6 0.5
O E:ARG93 4.0 28.2 0.5
OG1 F:THR60 4.0 40.4 1.0
CB E:PHE97 4.1 21.6 1.0
CH2 E:TRP94 4.1 28.6 1.0
NE2 F:GLN61 4.1 23.7 1.0
O E:ARG93 4.1 27.7 0.5
CD1 E:PHE97 4.1 25.5 1.0
CZ2 E:TRP94 4.2 28.8 1.0
CZ3 E:TRP94 4.2 26.7 1.0
CE3 E:TRP94 4.3 24.4 1.0
CE2 E:TRP94 4.3 28.8 1.0
CG E:PHE97 4.4 22.2 1.0
CD2 E:TRP94 4.4 23.8 1.0
CG F:GLN61 4.4 28.0 1.0
O E:HOH2071 4.5 34.0 1.0
C E:ARG93 4.6 28.4 0.5
O F:HOH2017 4.7 53.2 1.0
C E:ARG93 4.7 28.1 0.5
CD F:GLN61 4.8 30.0 1.0
NE E:ARG93 4.8 54.3 0.5
CB E:ARG93 4.9 23.2 0.5
CB E:ARG93 4.9 24.8 0.5
CG E:ARG93 4.9 36.4 0.5
NE E:ARG93 5.0 19.3 0.5

Chlorine binding site 5 out of 6 in 2x64

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Chlorine binding site 5 out of 6 in the Glutathione-S-Transferase From Xylella Fastidiosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Glutathione-S-Transferase From Xylella Fastidiosa within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl1206

b:76.0
occ:1.00
O E:HOH2030 2.8 33.0 1.0
NE F:ARG93 3.1 32.9 1.0
CG F:ARG93 3.5 29.7 1.0
OG1 E:THR60 3.6 29.3 1.0
O E:HOH2029 3.7 34.2 1.0
CD F:ARG93 3.7 34.6 1.0
CE2 F:TRP94 3.9 21.2 1.0
CZ2 F:TRP94 3.9 21.1 1.0
CZ F:ARG93 4.0 33.5 1.0
O E:HOH2022 4.1 50.2 1.0
NH2 F:ARG93 4.1 28.4 1.0
CB F:ARG93 4.1 25.1 1.0
NE1 F:TRP94 4.2 20.6 1.0
CD2 F:TRP94 4.3 16.4 1.0
CH2 F:TRP94 4.4 20.6 1.0
O F:ARG93 4.4 25.9 1.0
O F:HOH2014 4.5 55.0 1.0
C F:ARG93 4.5 25.6 1.0
CE3 F:TRP94 4.7 17.2 1.0
CZ3 F:TRP94 4.7 18.8 1.0
CG E:GLN61 4.7 13.1 1.0
CD1 F:TRP94 4.8 20.9 1.0
CG F:TRP94 4.9 16.9 1.0
CA F:ARG93 4.9 24.4 1.0
N F:TRP94 5.0 20.1 1.0
CB E:THR60 5.0 27.8 1.0

Chlorine binding site 6 out of 6 in 2x64

Go back to Chlorine Binding Sites List in 2x64
Chlorine binding site 6 out of 6 in the Glutathione-S-Transferase From Xylella Fastidiosa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Glutathione-S-Transferase From Xylella Fastidiosa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1206

b:63.5
occ:1.00
NE2 A:GLN61 3.6 25.1 1.0
OG1 A:THR60 4.0 46.7 1.0
CD1 B:PHE97 4.0 38.1 1.0
CB B:PHE97 4.1 32.9 1.0
O B:ARG93 4.3 29.7 1.0
CG B:PHE97 4.4 34.8 1.0
CG A:GLN61 4.4 30.5 1.0
CD A:GLN61 4.5 34.5 1.0
CH2 B:TRP94 4.6 30.4 1.0
CZ3 B:TRP94 4.6 28.1 1.0
CZ2 B:TRP94 4.7 31.7 1.0
CE3 B:TRP94 4.8 25.8 1.0
OG A:SER46 4.9 78.5 1.0
CE2 B:TRP94 4.9 31.8 1.0
NE B:ARG93 4.9 43.5 1.0
CD2 B:TRP94 4.9 25.9 1.0
CE1 B:PHE97 5.0 39.5 1.0
C B:ARG93 5.0 29.6 1.0
CA B:PHE97 5.0 29.9 1.0

Reference:

N.C.Rodrigues, J.R.C.Muniz, L.Bleicher, W.Garcia, R.F.Travensolo, A.P.Ulian-De-Araujo, E.Carrilho, R.Garratt. Structural and Biophysical Characterization of the Recombinant Glutathione-S-Transferase From Xylella To Be Published.
Page generated: Sat Jul 20 13:31:06 2024

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