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Chlorine in PDB 2xb0: Dna-Binding Domain From Saccharomyces Cerevisiae Chromatin- Remodelling Protein CHD1

Protein crystallography data

The structure of Dna-Binding Domain From Saccharomyces Cerevisiae Chromatin- Remodelling Protein CHD1, PDB code: 2xb0 was solved by D.P.Ryan, R.Sundaramoorthy, T.Owen-Hughes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.255 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.450, 91.120, 98.510, 90.00, 90.00, 90.00
R / Rfree (%) 20.5 / 24.79

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Dna-Binding Domain From Saccharomyces Cerevisiae Chromatin- Remodelling Protein CHD1 (pdb code 2xb0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Dna-Binding Domain From Saccharomyces Cerevisiae Chromatin- Remodelling Protein CHD1, PDB code: 2xb0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2xb0

Go back to Chlorine Binding Sites List in 2xb0
Chlorine binding site 1 out of 2 in the Dna-Binding Domain From Saccharomyces Cerevisiae Chromatin- Remodelling Protein CHD1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Dna-Binding Domain From Saccharomyces Cerevisiae Chromatin- Remodelling Protein CHD1 within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl1267

b:52.4
occ:1.00
H X:GLN193 2.6 42.9 1.0
HA X:SER190 3.0 45.5 1.0
HB3 X:SER190 3.0 51.0 1.0
HB X:THR192 3.0 73.5 1.0
HG3 X:GLN193 3.0 54.4 1.0
O X:HOH2029 3.1 57.5 1.0
H X:THR192 3.2 46.8 1.0
HB2 X:GLN193 3.3 55.3 1.0
N X:GLN193 3.4 35.8 1.0
C X:SER190 3.5 38.8 1.0
CA X:SER190 3.5 37.9 1.0
OE1 X:GLN193 3.6 59.8 1.0
O X:SER190 3.6 32.9 1.0
CB X:SER190 3.7 42.5 1.0
CG X:GLN193 3.7 45.4 1.0
N X:THR192 3.8 39.0 1.0
CB X:GLN193 3.8 46.1 1.0
CB X:THR192 3.9 61.3 1.0
N X:TRP191 4.0 37.4 1.0
CD X:GLN193 4.1 56.0 1.0
CA X:THR192 4.2 38.4 1.0
H X:TRP191 4.2 44.8 1.0
CA X:GLN193 4.3 39.1 1.0
C X:THR192 4.3 41.6 1.0
OG X:SER190 4.3 38.0 1.0
O X:HOH2091 4.3 47.4 1.0
HB2 X:SER190 4.5 51.0 1.0
OG1 X:THR192 4.5 53.0 1.0
HG2 X:GLN193 4.6 54.4 1.0
HG X:SER190 4.7 45.6 1.0
C X:TRP191 4.7 43.0 1.0
HG1 X:THR192 4.7 63.6 1.0
HB3 X:GLN193 4.7 55.3 1.0
HZ3 X:LYS20 4.8 93.2 1.0
H X:ILE194 4.8 38.0 1.0
HA X:GLN193 4.8 47.0 1.0
HG23 X:THR192 4.9 66.1 1.0
N X:SER190 4.9 33.6 1.0
CG2 X:THR192 5.0 55.1 1.0
CA X:TRP191 5.0 33.3 1.0

Chlorine binding site 2 out of 2 in 2xb0

Go back to Chlorine Binding Sites List in 2xb0
Chlorine binding site 2 out of 2 in the Dna-Binding Domain From Saccharomyces Cerevisiae Chromatin- Remodelling Protein CHD1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Dna-Binding Domain From Saccharomyces Cerevisiae Chromatin- Remodelling Protein CHD1 within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl1268

b:60.1
occ:1.00
HA3 X:GLY1 2.3 0.4 1.0
H X:SER41 2.6 57.2 1.0
HB2 X:LEU3 2.7 88.3 1.0
H X:LEU3 2.7 88.0 1.0
HZ1 X:LYS44 2.8 1.0 1.0
CA X:GLY1 3.2 0.8 1.0
HD2 X:PRO2 3.2 0.2 1.0
HB3 X:SER41 3.3 83.8 1.0
HA X:LYS40 3.4 63.1 1.0
N X:SER41 3.4 47.7 1.0
HD2 X:LYS44 3.4 87.7 1.0
N X:LEU3 3.5 73.4 1.0
C X:GLY1 3.5 0.5 1.0
HA2 X:GLY1 3.6 0.4 1.0
CB X:LEU3 3.6 73.6 1.0
NZ X:LYS44 3.7 89.1 1.0
HB3 X:LYS40 3.7 60.2 1.0
N X:PRO2 3.8 89.4 1.0
CD X:PRO2 3.9 86.0 1.0
HE3 X:LYS44 3.9 0.3 1.0
HB3 X:LEU3 4.0 88.3 1.0
H3 X:GLY1 4.1 0.6 1.0
CB X:SER41 4.1 69.9 1.0
CA X:LEU3 4.1 71.5 1.0
CA X:LYS40 4.1 52.6 1.0
HZ3 X:LYS44 4.1 1.0 1.0
CE X:LYS44 4.2 83.6 1.0
C X:LYS40 4.2 58.8 1.0
HD22 X:LEU3 4.2 0.2 1.0
O X:GLY1 4.2 0.0 1.0
CD X:LYS44 4.2 73.1 1.0
N X:GLY1 4.2 0.7 1.0
OG X:SER41 4.2 69.5 1.0
HZ2 X:LYS44 4.3 1.0 1.0
CA X:SER41 4.3 63.8 1.0
HG X:SER41 4.4 83.5 1.0
CB X:LYS40 4.4 50.2 1.0
H X:GLY4 4.4 71.5 1.0
HD2 X:LYS40 4.5 65.8 1.0
HD3 X:PRO2 4.6 0.2 1.0
HG X:LEU3 4.6 95.6 1.0
C X:PRO2 4.6 76.8 1.0
CG X:LEU3 4.6 79.6 1.0
HD3 X:LYS40 4.6 65.8 1.0
C X:LEU3 4.7 65.9 1.0
HG2 X:PRO2 4.7 0.9 1.0
N X:GLY4 4.8 59.6 1.0
O X:GLY4 4.8 63.8 1.0
HD3 X:LYS44 4.8 87.7 1.0
CA X:PRO2 4.8 83.8 1.0
HA X:SER41 4.8 76.5 1.0
H2 X:GLY1 4.8 0.6 1.0
CD2 X:LEU3 4.8 83.5 1.0
H1 X:GLY1 4.9 0.6 1.0
HB2 X:SER41 4.9 83.8 1.0
CG X:PRO2 5.0 85.8 1.0
CD X:LYS40 5.0 54.8 1.0
HA X:LEU3 5.0 85.8 1.0

Reference:

D.P.Ryan, R.Sundaramoorthy, D.Martin, V.Singh, T.Owen-Hughes. The Dna-Binding Domain of the CHD1 Chromatin- Remodelling Enzyme Contains Sant and Slide Domains. Embo J. V. 30 2596 2011.
ISSN: ISSN 0261-4189
PubMed: 21623345
DOI: 10.1038/EMBOJ.2011.166
Page generated: Sat Jul 20 13:40:26 2024

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