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Chlorine in PDB 2xef: Human Glutamate Carboxypeptidase II in Complex with Antibody-Recruiting Molecule Arm-P8

Enzymatic activity of Human Glutamate Carboxypeptidase II in Complex with Antibody-Recruiting Molecule Arm-P8

All present enzymatic activity of Human Glutamate Carboxypeptidase II in Complex with Antibody-Recruiting Molecule Arm-P8:
3.4.17.21;

Protein crystallography data

The structure of Human Glutamate Carboxypeptidase II in Complex with Antibody-Recruiting Molecule Arm-P8, PDB code: 2xef was solved by A.X.Zhang, R.P.Murelli, C.Barinka, J.Michel, A.Cocleaza, W.L.Jorgensen, J.Lubkowski, D.A.Spiegel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.59
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.844, 130.026, 158.741, 90.00, 90.00, 90.00
R / Rfree (%) 16.075 / 18.266

Other elements in 2xef:

The structure of Human Glutamate Carboxypeptidase II in Complex with Antibody-Recruiting Molecule Arm-P8 also contains other interesting chemical elements:

Calcium (Ca) 1 atom
Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Glutamate Carboxypeptidase II in Complex with Antibody-Recruiting Molecule Arm-P8 (pdb code 2xef). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Human Glutamate Carboxypeptidase II in Complex with Antibody-Recruiting Molecule Arm-P8, PDB code: 2xef:

Chlorine binding site 1 out of 1 in 2xef

Go back to Chlorine Binding Sites List in 2xef
Chlorine binding site 1 out of 1 in the Human Glutamate Carboxypeptidase II in Complex with Antibody-Recruiting Molecule Arm-P8


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Glutamate Carboxypeptidase II in Complex with Antibody-Recruiting Molecule Arm-P8 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1754

b:6.9
occ:1.00
 O A:HOH2315 3.2 20.4 1.0
ND2 A:ASN451 3.3 17.6 1.0
N A:ASP453 3.3 16.7 1.0
NE A:ARG534 3.3 20.0 1.0
NH2 A:ARG534 3.4 20.3 1.0
NH2 A:ARG536 3.5 21.3 1.0
CB A:ASP453 3.7 16.2 1.0
CZ A:ARG534 3.8 19.7 1.0
CA A:ASP453 3.9 17.6 1.0
CB A:ARG534 3.9 16.5 1.0
NH2 A:ARG580 4.1 19.5 1.0
C A:ASP453 4.1 18.7 1.0
CB A:ASN451 4.2 14.5 1.0
CG A:ASN451 4.2 17.0 1.0
N A:ALA452 4.4 16.4 1.0
C A:ALA452 4.4 17.4 1.0
CZ A:ARG536 4.4 24.2 1.0
O A:ASP453 4.4 18.6 1.0
C A:ASN451 4.4 17.3 1.0
CA A:ALA452 4.5 17.7 1.0
NE A:ARG536 4.5 22.3 1.0
CD A:ARG534 4.5 19.4 1.0
O A:ASN451 4.6 18.3 1.0
O A:SER454 4.6 18.2 1.0
CG A:ARG534 4.6 16.9 1.0
N A:SER454 4.7 17.5 1.0
ND2 A:ASN519 4.9 15.7 1.0
CZ A:ARG580 4.9 21.3 1.0
CA A:ARG534 4.9 16.1 1.0
CA A:ASN451 5.0 15.1 1.0

Reference:

A.X.Zhang, R.P.Murelli, C.Barinka, J.Michel, A.Cocleaza, W.L.Jorgensen, J.Lubkowski, D.A.Spiegel. A Remote Arene-Binding Site on Prostate Specific Membrane Antigen Revealed By Antibody-Recruiting Small Molecules. J.Am.Chem.Soc. V. 132 12711 2010.
ISSN: ISSN 0002-7863
PubMed: 20726553
DOI: 10.1021/JA104591M
Page generated: Fri Jul 11 01:55:33 2025

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