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Chlorine in PDB 2xmk: Visualising the Metal-Binding Versatility of Copper Trafficking Sites: ATX1 Side-to-Side (Anaerobic)

Protein crystallography data

The structure of Visualising the Metal-Binding Versatility of Copper Trafficking Sites: ATX1 Side-to-Side (Anaerobic), PDB code: 2xmk was solved by A.Badarau, S.J.Firbank, A.A.Mccarthy, M.J.Banfield, C.Dennison, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.22 / 1.35
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 62.991, 41.709, 55.791, 90.00, 107.49, 90.00
R / Rfree (%) 12.94 / 15.274

Other elements in 2xmk:

The structure of Visualising the Metal-Binding Versatility of Copper Trafficking Sites: ATX1 Side-to-Side (Anaerobic) also contains other interesting chemical elements:

Copper (Cu) 4 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Visualising the Metal-Binding Versatility of Copper Trafficking Sites: ATX1 Side-to-Side (Anaerobic) (pdb code 2xmk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Visualising the Metal-Binding Versatility of Copper Trafficking Sites: ATX1 Side-to-Side (Anaerobic), PDB code: 2xmk:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2xmk

Go back to Chlorine Binding Sites List in 2xmk
Chlorine binding site 1 out of 2 in the Visualising the Metal-Binding Versatility of Copper Trafficking Sites: ATX1 Side-to-Side (Anaerobic)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Visualising the Metal-Binding Versatility of Copper Trafficking Sites: ATX1 Side-to-Side (Anaerobic) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1103

b:8.9
occ:1.00
CU A:CU2102 2.4 8.2 1.0
NE2 B:HIS2061 3.2 13.2 1.0
NE2 A:HIS1061 3.2 12.8 1.0
CA A:CYS1015 3.7 6.5 1.0
CA B:CYS2015 3.7 6.8 1.0
SG A:CYS1015 3.7 8.0 1.0
SG B:CYS2015 3.7 8.1 1.0
CB B:ALA2018 3.8 9.0 1.0
CB A:ALA1018 3.9 9.6 1.0
CB A:CYS1015 3.9 6.9 1.0
CB B:CYS2015 4.0 7.6 1.0
CE1 A:HIS1061 4.0 13.8 1.0
CE1 B:HIS2061 4.0 14.0 1.0
CD2 B:HIS2061 4.2 12.2 1.0
O A:HOH3116 4.3 29.0 1.0
CD2 A:HIS1061 4.3 12.4 1.0
N A:CYS1015 4.4 6.6 1.0
O A:ALA1014 4.4 8.0 1.0
N B:CYS2015 4.5 6.2 1.0
O B:ALA2014 4.5 8.0 1.0
O B:CYS2015 4.6 7.5 1.0
O A:CYS1015 4.6 7.6 1.0
C B:CYS2015 4.7 6.3 1.0
C A:CYS1015 4.7 6.7 1.0
C A:ALA1014 4.8 7.7 1.0
C B:ALA2014 4.8 7.1 1.0

Chlorine binding site 2 out of 2 in 2xmk

Go back to Chlorine Binding Sites List in 2xmk
Chlorine binding site 2 out of 2 in the Visualising the Metal-Binding Versatility of Copper Trafficking Sites: ATX1 Side-to-Side (Anaerobic)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Visualising the Metal-Binding Versatility of Copper Trafficking Sites: ATX1 Side-to-Side (Anaerobic) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1104

b:12.8
occ:0.50
CU B:CU1101 2.4 9.5 1.0
O A:HOH3010 3.0 21.7 1.0
CB A:CYS1012 3.5 6.9 1.0
SG A:CYS1012 3.6 8.4 1.0
CB B:CYS2012 3.6 6.7 1.0
SG B:CYS2012 3.7 8.2 1.0
CU B:CU1102 4.8 10.2 1.0
CU A:CU2101 4.9 10.0 1.0
O B:ALA2011 4.9 8.7 1.0
CA A:CYS1012 5.0 7.6 1.0

Reference:

A.Badarau, S.J.Firbank, A.A.Mccarthy, M.J.Banfield, C.Dennison. Visualizing the Metal-Binding Versatility of Copper Trafficking Sites . Biochemistry V. 49 7798 2010.
ISSN: ISSN 0006-2960
PubMed: 20726513
DOI: 10.1021/BI101064W
Page generated: Fri Jul 11 02:02:39 2025

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