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Chlorine in PDB 2xrl: Tet-Repressor Class D T103A with Doxycycline

Protein crystallography data

The structure of Tet-Repressor Class D T103A with Doxycycline, PDB code: 2xrl was solved by G.J.Palm, P.Waack, W.Hinrichs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.87 / 1.85
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 67.888, 67.888, 180.438, 90.00, 90.00, 90.00
R / Rfree (%) 23.6 / 27.9

Other elements in 2xrl:

The structure of Tet-Repressor Class D T103A with Doxycycline also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Tet-Repressor Class D T103A with Doxycycline (pdb code 2xrl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Tet-Repressor Class D T103A with Doxycycline, PDB code: 2xrl:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2xrl

Go back to Chlorine Binding Sites List in 2xrl
Chlorine binding site 1 out of 2 in the Tet-Repressor Class D T103A with Doxycycline


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Tet-Repressor Class D T103A with Doxycycline within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1209

b:53.5
occ:1.00
N A:LEU4 3.2 53.3 1.0
NH1 A:ARG3 3.4 61.6 1.0
CD A:ARG3 3.7 60.1 1.0
CA A:LEU4 3.9 52.6 1.0
CB A:LEU4 4.0 52.0 1.0
CA A:ARG3 4.0 55.4 1.0
C A:ARG3 4.1 53.9 1.0
C A:LEU4 4.2 55.0 1.0
N A:ASN5 4.4 55.2 1.0
CG A:LEU4 4.4 49.2 1.0
CZ A:ARG3 4.4 61.6 1.0
O A:SER2 4.5 56.6 1.0
NE A:ARG3 4.5 60.8 1.0
CG A:ARG3 4.7 59.8 1.0
CB A:ARG3 4.7 55.7 1.0
O A:LEU4 4.9 55.2 1.0

Chlorine binding site 2 out of 2 in 2xrl

Go back to Chlorine Binding Sites List in 2xrl
Chlorine binding site 2 out of 2 in the Tet-Repressor Class D T103A with Doxycycline


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Tet-Repressor Class D T103A with Doxycycline within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1210

b:57.8
occ:1.00
N A:ARG3 3.6 55.7 1.0
CA A:SER2 3.7 57.4 1.0
C A:SER2 3.9 56.5 1.0
CG A:ARG3 4.1 59.8 1.0
CB A:SER2 4.1 58.1 1.0
CA A:ARG3 4.4 55.4 1.0
CB A:ARG3 4.5 55.7 1.0
O A:SER2 4.8 56.6 1.0
N A:SER2 5.0 58.0 1.0

Reference:

W.Hinrichs, G.J.Palm, P.Waack, W.Hinrichs. N/A N/A.
Page generated: Sat Jul 20 14:08:47 2024

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