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Chlorine in PDB 2y68: Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase
Enzymatic activity of Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase
All present enzymatic activity of Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase:
6.3.2.9;
6.3.2.9;
Protein crystallography data
The structure of Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase, PDB code: 2y68
was solved by
T.Tomasic,
N.Zidar,
R.Sink,
A.Kovac,
D.Patin,
D.Blanot,
C.Contreras-Martel,
A.Dessen,
M.Muller-Premru,
A.Zega,
S.Gobec,
L.Peterlin-Masic,
D.Kikelj,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 46.35 / 1.49 |
| Space group | P 41 |
| Cell size a, b, c (Å), α, β, γ (°) | 65.544, 65.544, 134.959, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 17.9 / 20.4 |
Other elements in 2y68:
The structure of Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase also contains other interesting chemical elements:
| Fluorine | (F) | 1 atom |
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase
(pdb code 2y68). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase, PDB code: 2y68:
Jump to Chlorine binding site number: 1; 2; 3;
In total 3 binding sites of Chlorine where determined in the Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase, PDB code: 2y68:
Jump to Chlorine binding site number: 1; 2; 3;
Chlorine binding site 1 out of 3 in 2y68
Go back to
Chlorine Binding Sites List in 2y68
Chlorine binding site 1 out
of 3 in the Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase within 5.0Å range:
|
Chlorine binding site 2 out of 3 in 2y68
Go back to
Chlorine Binding Sites List in 2y68
Chlorine binding site 2 out
of 3 in the Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase within 5.0Å range:
|
Chlorine binding site 3 out of 3 in 2y68
Go back to
Chlorine Binding Sites List in 2y68
Chlorine binding site 3 out
of 3 in the Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Structure-Based Design of A New Series of D-Glutamic Acid-Based Inhibitors of Bacterial Murd Ligase within 5.0Å range:
|
Reference:
T.Tomasic,
N.Zidar,
R.Sink,
A.Kovac,
D.Blanot,
C.Contreras-Martel,
A.Dessen,
M.Muller-Premru,
A.Zega,
S.Gobec,
D.Kikelj,
L.P.Masic.
Structure-Based Design of A New Series of D-Glutamic Acid Based Inhibitors of Bacterial Udp-N-Acetylmuramoyl-L-Alanine:D-Glutamate Ligase (Murd). J. Med. Chem. V. 54 4600 2011.
ISSN: ISSN 1520-4804
PubMed: 21591605
DOI: 10.1021/JM2002525
Page generated: Fri Jul 11 02:31:19 2025
ISSN: ISSN 1520-4804
PubMed: 21591605
DOI: 10.1021/JM2002525
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