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Chlorine in PDB 2yd6: Crystal Structure of the N-Terminal IG1-2 Module of Human Receptor Protein Tyrosine Phosphatase Delta

Enzymatic activity of Crystal Structure of the N-Terminal IG1-2 Module of Human Receptor Protein Tyrosine Phosphatase Delta

All present enzymatic activity of Crystal Structure of the N-Terminal IG1-2 Module of Human Receptor Protein Tyrosine Phosphatase Delta:
3.1.3.48;

Protein crystallography data

The structure of Crystal Structure of the N-Terminal IG1-2 Module of Human Receptor Protein Tyrosine Phosphatase Delta, PDB code: 2yd6 was solved by C.H.Coles, Y.Shen, A.P.Tenney, C.Siebold, G.C.Sutton, W.Lu, J.T.Gallagher, E.Y.Jones, J.G.Flanagan, A.R.Aricescu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.64 / 1.35
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 48.710, 48.710, 145.910, 90.00, 90.00, 120.00
R / Rfree (%) 14.1 / 17.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the N-Terminal IG1-2 Module of Human Receptor Protein Tyrosine Phosphatase Delta (pdb code 2yd6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the N-Terminal IG1-2 Module of Human Receptor Protein Tyrosine Phosphatase Delta, PDB code: 2yd6:

Chlorine binding site 1 out of 1 in 2yd6

Go back to Chlorine Binding Sites List in 2yd6
Chlorine binding site 1 out of 1 in the Crystal Structure of the N-Terminal IG1-2 Module of Human Receptor Protein Tyrosine Phosphatase Delta


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the N-Terminal IG1-2 Module of Human Receptor Protein Tyrosine Phosphatase Delta within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1222

b:16.3
occ:1.00
 O A:HOH2015 2.9 21.8 1.0
O A:HOH2011 3.0 17.6 1.0
N A:ILE44 3.2 5.9 1.0
N A:VAL31 3.3 9.2 1.0
O A:HOH2039 3.4 18.7 1.0
CA A:PRO30 3.5 9.2 1.0
CA A:PHE43 3.7 6.0 1.0
C A:PRO30 3.9 9.1 1.0
CG2 A:VAL31 3.9 16.2 1.0
C A:PHE43 4.0 5.5 1.0
CB A:PRO30 4.0 9.3 1.0
O A:VAL31 4.0 12.1 1.0
O A:ILE44 4.1 9.3 1.0
CB A:ILE44 4.1 8.4 1.0
O A:SER42 4.1 9.5 1.0
CA A:ILE44 4.2 6.9 1.0
CG1 A:ILE44 4.3 10.3 1.0
CA A:VAL31 4.3 10.1 1.0
CD1 A:PHE43 4.4 7.4 1.0
CB A:PHE43 4.5 6.0 1.0
CD1 A:ILE44 4.5 16.5 1.0
C A:ILE44 4.6 6.9 1.0
CB A:VAL31 4.6 12.1 1.0
O A:THR29 4.6 10.4 1.0
C A:VAL31 4.7 9.7 1.0
N A:PRO30 4.7 8.6 1.0
N A:PHE43 4.7 5.8 1.0
C A:SER42 4.8 6.2 1.0
O A:HOH2007 4.9 24.7 1.0
CG A:PHE43 4.9 6.2 1.0

Reference:

C.H.Coles, Y.Shen, A.P.Tenney, C.Siebold, G.C.Sutton, W.Lu, J.T.Gallagher, E.Y.Jones, J.G.Flanagan, A.R.Aricescu. Proteoglycan-Specific Molecular Switch For Rptp Sigma Clustering and Neuronal Extension. Science V. 332 484 2011.
ISSN: ISSN 0036-8075
PubMed: 21454754
DOI: 10.1126/SCIENCE.1200840
Page generated: Fri Jul 11 02:35:32 2025

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