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Chlorine in PDB 2z2n: Crystal Structure of Selenomethionine Substituted Virginiamycin B Lyase From Staphylococcus Aureus

Protein crystallography data

The structure of Crystal Structure of Selenomethionine Substituted Virginiamycin B Lyase From Staphylococcus Aureus, PDB code: 2z2n was solved by M.Korczynska, A.M.Berghuis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.65
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 92.970, 34.752, 86.601, 90.00, 117.86, 90.00
R / Rfree (%) 15.6 / 20.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Selenomethionine Substituted Virginiamycin B Lyase From Staphylococcus Aureus (pdb code 2z2n). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Selenomethionine Substituted Virginiamycin B Lyase From Staphylococcus Aureus, PDB code: 2z2n:

Chlorine binding site 1 out of 1 in 2z2n

Go back to Chlorine Binding Sites List in 2z2n
Chlorine binding site 1 out of 1 in the Crystal Structure of Selenomethionine Substituted Virginiamycin B Lyase From Staphylococcus Aureus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Selenomethionine Substituted Virginiamycin B Lyase From Staphylococcus Aureus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl300

b:12.1
occ:1.00
N A:ASN109 3.2 12.1 1.0
NE1 A:TRP113 3.2 13.1 1.0
N A:ASP111 3.4 13.7 1.0
CB A:ASN109 3.5 13.0 1.0
CD A:PRO108 3.6 13.2 1.0
CB A:ASP111 3.6 13.2 1.0
N A:PRO108 3.6 12.1 1.0
C A:GLY107 3.7 13.4 1.0
N A:GLY110 3.7 14.0 1.0
CA A:ASN109 3.7 13.7 1.0
NH2 A:ARG124 3.7 23.9 1.0
CA A:GLY107 3.8 12.1 1.0
C A:ASN109 3.9 13.6 1.0
OD2 A:ASP111 4.0 18.3 1.0
CG A:ASP111 4.0 17.7 1.0
CA A:ASP111 4.0 11.8 1.0
CD1 A:TRP113 4.1 13.5 1.0
CE2 A:TRP113 4.1 13.1 1.0
O A:GLY107 4.2 12.9 1.0
C A:PRO108 4.2 14.6 1.0
CG A:PRO108 4.3 9.6 1.0
O A:ASP111 4.3 11.0 1.0
CZ2 A:TRP113 4.4 12.4 1.0
CZ A:ARG124 4.4 23.4 1.0
NE A:ARG124 4.4 20.1 1.0
CA A:PRO108 4.5 13.9 1.0
C A:GLY110 4.5 14.4 1.0
CG A:ASN109 4.5 18.1 1.0
N A:GLY107 4.5 11.7 1.0
C A:ASP111 4.5 12.8 1.0
ND2 A:ASN109 4.5 26.0 1.0
CA A:GLY110 4.6 14.4 1.0
OD1 A:ASP111 4.8 18.0 1.0
O A:ASN109 4.9 14.5 1.0

Reference:

M.Korczynska, T.A.Mukhtar, G.D.Wright, A.M.Berghuis. Structural Basis For Streptogramin B Resistance in Staphylococcus Aureus By Virginiamycin B Lyase Proc.Natl.Acad.Sci.Usa V. 104 10388 2007.
ISSN: ISSN 0027-8424
PubMed: 17563376
DOI: 10.1073/PNAS.0701809104
Page generated: Sat Jul 20 15:24:11 2024

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