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Chlorine in PDB 3bdv: Crystal Structure of A Putative Yden-Like Hydrolase (ECA3091) From Pectobacterium Atrosepticum SCRI1043 at 1.66 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Yden-Like Hydrolase (ECA3091) From Pectobacterium Atrosepticum SCRI1043 at 1.66 A Resolution, PDB code: 3bdv was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.56 / 1.66
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 35.655, 93.302, 104.095, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 21.3

Other elements in 3bdv:

The structure of Crystal Structure of A Putative Yden-Like Hydrolase (ECA3091) From Pectobacterium Atrosepticum SCRI1043 at 1.66 A Resolution also contains other interesting chemical elements:

Calcium (Ca) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Yden-Like Hydrolase (ECA3091) From Pectobacterium Atrosepticum SCRI1043 at 1.66 A Resolution (pdb code 3bdv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Putative Yden-Like Hydrolase (ECA3091) From Pectobacterium Atrosepticum SCRI1043 at 1.66 A Resolution, PDB code: 3bdv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3bdv

Go back to Chlorine Binding Sites List in 3bdv
Chlorine binding site 1 out of 2 in the Crystal Structure of A Putative Yden-Like Hydrolase (ECA3091) From Pectobacterium Atrosepticum SCRI1043 at 1.66 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Yden-Like Hydrolase (ECA3091) From Pectobacterium Atrosepticum SCRI1043 at 1.66 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl193

b:23.9
occ:1.00
O A:HOH229 2.9 27.7 1.0
OG A:SER81 3.0 24.6 1.0
N A:LEU25 3.2 20.9 1.0
N A:PHE82 3.3 18.6 1.0
CB A:SER81 3.3 25.2 1.0
CB A:PHE82 3.5 18.3 1.0
O A:HOH292 3.5 37.9 1.0
CD2 A:LEU25 3.6 16.3 0.3
CZ A:PHE112 3.7 21.8 1.0
CB A:LEU25 3.7 23.5 0.7
CB A:LEU25 3.8 21.0 0.3
CA A:GLY24 3.9 20.6 1.0
CA A:PHE82 4.0 18.5 1.0
C A:GLY24 4.1 20.6 1.0
CA A:LEU25 4.1 23.5 0.7
CA A:LEU25 4.1 21.4 0.3
CE2 A:PHE112 4.1 24.3 1.0
CG A:LEU25 4.2 18.2 0.3
C A:SER81 4.3 22.2 1.0
CA A:SER81 4.4 21.6 1.0
CE1 A:PHE112 4.5 22.3 1.0
O A:HOH220 4.7 25.8 1.0
NE2 A:HIS162 4.7 22.5 1.0
CD1 A:LEU137 4.8 18.6 1.0
CG A:PHE82 4.8 16.1 1.0
O A:HIS80 4.9 18.7 1.0
O A:LEU25 4.9 23.4 1.0

Chlorine binding site 2 out of 2 in 3bdv

Go back to Chlorine Binding Sites List in 3bdv
Chlorine binding site 2 out of 2 in the Crystal Structure of A Putative Yden-Like Hydrolase (ECA3091) From Pectobacterium Atrosepticum SCRI1043 at 1.66 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Yden-Like Hydrolase (ECA3091) From Pectobacterium Atrosepticum SCRI1043 at 1.66 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl192

b:31.1
occ:1.00
O B:HOH221 2.8 30.4 1.0
OG B:SER81 3.1 20.9 1.0
N B:LEU25 3.2 22.4 1.0
N B:PHE82 3.2 19.9 1.0
CB B:PHE82 3.4 21.7 1.0
CB B:SER81 3.5 22.0 1.0
CD1 B:LEU25 3.6 22.1 0.3
CB B:LEU25 3.6 26.2 0.7
CB B:LEU25 3.7 22.9 0.3
CZ B:PHE112 3.9 30.4 1.0
CA B:PHE82 4.0 19.3 1.0
CA B:GLY24 4.0 20.6 1.0
CA B:LEU25 4.0 23.6 0.7
CA B:LEU25 4.0 22.0 0.3
C B:GLY24 4.1 23.6 1.0
CG B:LEU25 4.1 19.5 0.3
C B:SER81 4.3 21.5 1.0
CA B:SER81 4.5 21.6 1.0
CD2 B:LEU25 4.5 20.7 0.3
CE2 B:PHE112 4.5 25.1 1.0
CD1 B:LEU137 4.6 21.8 1.0
CG B:PHE82 4.7 20.4 1.0
NE2 B:HIS162 4.7 19.6 1.0
O B:HOH229 4.7 33.0 1.0
CE1 B:PHE112 4.8 30.6 1.0
O B:LEU25 4.9 22.9 1.0
O B:HIS80 4.9 17.0 1.0
CG B:LEU25 4.9 30.0 0.7
C B:LEU25 5.0 23.1 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 03:25:29 2025

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