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Chlorine in PDB 3bi6: WEE1 Kinase Complex with Inhibitor PD352396

Enzymatic activity of WEE1 Kinase Complex with Inhibitor PD352396

All present enzymatic activity of WEE1 Kinase Complex with Inhibitor PD352396:
2.7.10.2;

Protein crystallography data

The structure of WEE1 Kinase Complex with Inhibitor PD352396, PDB code: 3bi6 was solved by C.J.Squire, J.M.Dickson, I.Ivanovic, E.N.Baker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.20
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 68.330, 68.330, 157.311, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 25.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the WEE1 Kinase Complex with Inhibitor PD352396 (pdb code 3bi6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the WEE1 Kinase Complex with Inhibitor PD352396, PDB code: 3bi6:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3bi6

Go back to Chlorine Binding Sites List in 3bi6
Chlorine binding site 1 out of 2 in the WEE1 Kinase Complex with Inhibitor PD352396


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of WEE1 Kinase Complex with Inhibitor PD352396 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:25.9
occ:1.00
O A:HOH702 2.9 36.2 1.0
N A:SER430 3.3 16.6 1.0
OG A:SER430 3.4 24.5 1.0
NH2 A:ARG481 3.5 30.8 1.0
NH1 A:ARG481 3.6 29.8 1.0
CD A:PRO429 3.7 18.0 1.0
CB A:SER430 3.7 20.7 1.0
N A:PRO429 3.9 18.4 1.0
O A:HOH612 4.0 22.7 1.0
CZ A:ARG481 4.0 31.1 1.0
CB A:PRO429 4.1 17.3 1.0
CD A:LYS428 4.1 19.1 1.0
CA A:SER430 4.1 18.9 1.0
C A:PRO429 4.1 17.4 1.0
CB A:LYS428 4.1 16.9 1.0
CB A:ALA385 4.1 19.7 1.0
CG A:LYS428 4.2 17.7 1.0
O A:HOH659 4.2 40.0 1.0
CA A:PRO429 4.2 17.1 1.0
CG A:PRO429 4.2 15.8 1.0
CE1 A:PHE482 4.4 18.1 1.0
C A:LYS428 4.5 19.9 1.0
CZ A:PHE482 4.6 18.0 1.0
CA A:LYS428 4.9 18.9 1.0

Chlorine binding site 2 out of 2 in 3bi6

Go back to Chlorine Binding Sites List in 3bi6
Chlorine binding site 2 out of 2 in the WEE1 Kinase Complex with Inhibitor PD352396


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of WEE1 Kinase Complex with Inhibitor PD352396 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl901

b:21.8
occ:1.00
CL5 A:396901 0.0 21.8 1.0
C8 A:396901 1.7 14.9 1.0
C9 A:396901 2.6 16.9 1.0
C7 A:396901 2.8 19.2 1.0
C2 A:396901 3.2 19.7 1.0
O2 A:396901 3.2 22.0 1.0
C3 A:396901 3.4 17.6 1.0
C6 A:396901 3.4 20.7 1.0
O A:ALA326 3.7 24.4 1.0
CB A:ALA326 3.9 19.4 1.0
ND2 A:ASN376 3.9 18.4 1.0
C10 A:396901 3.9 18.9 1.0
C A:ALA326 4.0 22.9 1.0
N A:LYS328 4.0 25.6 1.0
CB A:LYS328 4.0 25.9 1.0
C12 A:396901 4.1 16.7 1.0
CG1 A:VAL313 4.1 21.9 1.0
CB A:ASN376 4.1 21.5 1.0
C1 A:396901 4.1 20.4 1.0
CG A:ASN376 4.4 22.6 1.0
N A:ILE327 4.4 22.5 1.0
C A:ILE327 4.4 25.0 1.0
N1 A:396901 4.4 20.9 1.0
C4 A:396901 4.4 18.1 1.0
C11 A:396901 4.5 23.2 1.0
O A:ILE374 4.5 26.8 1.0
CA A:LYS328 4.6 27.5 1.0
CA A:ILE327 4.6 23.5 1.0
CA A:ALA326 4.6 22.0 1.0
O A:HOH605 4.9 21.9 1.0
C5 A:396901 4.9 18.9 1.0
N A:ASN376 4.9 21.3 1.0
CG2 A:VAL313 5.0 23.9 1.0
CG2 A:ILE374 5.0 26.3 1.0

Reference:

J.B.Smaill, H.H.Lee, B.D.Palmer, A.M.Thompson, C.J.Squire, E.N.Baker, R.J.Booth, A.Kraker, K.Hook, W.A.Denny. Synthesis and Structure-Activity Relationships of Soluble 8-Substituted 4-(2-Chlorophenyl)-9-Hydroxypyrrolo[3,4-C]Carbazole-1,3(2H, 6H)-Diones As Inhibitors of the WEE1 and CHK1 Checkpoint Kinases. Bioorg.Med.Chem.Lett. V. 18 929 2008.
ISSN: ISSN 0960-894X
PubMed: 18191399
DOI: 10.1016/J.BMCL.2007.12.046
Page generated: Fri Jul 11 03:27:49 2025

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