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Chlorine in PDB 3bmb: Crystal Structure of A New Rna Polymerase Interacting Protein

Protein crystallography data

The structure of Crystal Structure of A New Rna Polymerase Interacting Protein, PDB code: 3bmb was solved by S.A.Darst, V.Lamour, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.86 / 1.91
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 68.500, 133.400, 66.060, 90.00, 90.00, 90.00
R / Rfree (%) 21.3 / 23.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A New Rna Polymerase Interacting Protein (pdb code 3bmb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A New Rna Polymerase Interacting Protein, PDB code: 3bmb:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3bmb

Go back to Chlorine Binding Sites List in 3bmb
Chlorine binding site 1 out of 2 in the Crystal Structure of A New Rna Polymerase Interacting Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A New Rna Polymerase Interacting Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl142

b:30.6
occ:1.00
O A:HOH182 2.8 24.7 1.0
N A:ILE30 3.2 21.4 1.0
CG A:PRO29 3.4 26.0 1.0
CG1 A:ILE30 3.6 24.7 1.0
CB A:ILE30 3.6 24.6 1.0
CD A:PRO29 3.6 25.7 1.0
N A:PRO29 3.7 24.7 1.0
CB A:LEU28 3.9 24.4 1.0
CA A:ILE30 4.0 22.4 1.0
C A:LEU28 4.1 24.4 1.0
C A:PRO29 4.2 22.7 1.0
CA A:PRO29 4.2 24.2 1.0
CB A:PRO29 4.3 24.4 1.0
CA A:LEU28 4.4 24.0 1.0
CD1 A:LEU28 4.5 29.2 1.0
CG A:LEU28 4.6 27.5 1.0
CG2 A:VAL115 4.7 24.2 1.0
O A:LEU28 4.8 23.5 1.0
CD2 A:LEU28 4.8 28.5 1.0
N A:ALA31 4.9 22.7 1.0
O A:MET91 4.9 18.8 1.0
CD1 A:ILE30 4.9 30.8 1.0
CG2 A:ILE30 5.0 24.2 1.0

Chlorine binding site 2 out of 2 in 3bmb

Go back to Chlorine Binding Sites List in 3bmb
Chlorine binding site 2 out of 2 in the Crystal Structure of A New Rna Polymerase Interacting Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A New Rna Polymerase Interacting Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl142

b:30.6
occ:1.00
O B:HOH190 2.9 32.8 1.0
N B:ILE30 3.4 29.8 1.0
CG B:PRO29 3.4 33.8 1.0
CD B:PRO29 3.5 33.1 1.0
CB B:ILE30 3.6 31.4 1.0
CG1 B:ILE30 3.6 32.2 1.0
CB B:LEU28 3.7 31.6 1.0
N B:PRO29 3.8 32.2 1.0
CA B:ILE30 4.1 31.2 1.0
C B:LEU28 4.1 31.7 1.0
CA B:LEU28 4.2 31.9 1.0
CD1 B:LEU28 4.3 32.7 1.0
C B:PRO29 4.4 30.4 1.0
CA B:PRO29 4.4 31.0 1.0
CG B:LEU28 4.4 33.8 1.0
CB B:PRO29 4.4 32.1 1.0
CD2 B:LEU28 4.5 32.4 1.0
O B:MET91 4.8 24.0 1.0
O B:LEU28 4.9 31.8 1.0
CG2 B:ILE30 4.9 32.1 1.0
N B:ALA31 4.9 31.3 1.0
CD1 B:ILE30 5.0 34.4 1.0
CG2 B:VAL115 5.0 41.2 1.0

Reference:

V.Lamour, S.T.Rutherford, K.Kuznedelov, U.A.Ramagopal, R.L.Gourse, K.Severinov, S.A.Darst. Crystal Structure of Escherichia Coli Rnk, A New Rna Polymerase-Interacting Protein. J.Mol.Biol. V. 383 367 2008.
ISSN: ISSN 0022-2836
PubMed: 18760284
DOI: 10.1016/J.JMB.2008.08.011
Page generated: Fri Jul 11 03:29:40 2025

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