Atomistry » Chlorine » PDB 3c4x-3ccm » 3c50
Atomistry »
  Chlorine »
    PDB 3c4x-3ccm »
      3c50 »

Chlorine in PDB 3c50: Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A

Enzymatic activity of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A

All present enzymatic activity of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A:
2.7.11.14;

Protein crystallography data

The structure of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A, PDB code: 3c50 was solved by P.Singh, J.J.G.Tesmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 65.504, 122.304, 174.076, 90.00, 90.00, 90.00
R / Rfree (%) 19 / n/a

Other elements in 3c50:

The structure of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A (pdb code 3c50). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A, PDB code: 3c50:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Chlorine binding site 1 out of 8 in 3c50

Go back to Chlorine Binding Sites List in 3c50
Chlorine binding site 1 out of 8 in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl566

b:41.1
occ:1.00
 O A:HOH631 3.0 35.4 1.0
NE A:ARG390 3.3 35.4 1.0
N A:PHE389 3.3 36.3 1.0
N A:ARG390 3.5 35.7 1.0
CA A:GLY387 3.5 37.0 1.0
C A:GLY387 3.6 36.9 1.0
CB A:PHE389 3.7 36.3 1.0
N A:PRO388 3.8 36.8 1.0
NH2 A:ARG390 3.8 37.0 1.0
CA A:PHE389 3.8 36.2 1.0
CB A:ARG390 3.9 35.6 1.0
CD A:PRO388 3.9 37.0 1.0
C A:PHE389 3.9 35.8 1.0
CG A:ARG390 4.0 35.4 1.0
CZ A:ARG390 4.0 35.5 1.0
O A:GLY387 4.1 37.3 1.0
CD1 A:PHE389 4.3 37.8 1.0
CD A:ARG390 4.3 36.0 1.0
CA A:ARG390 4.3 36.0 1.0
C A:PRO388 4.4 36.5 1.0
CG A:PHE389 4.5 37.0 1.0
N A:GLY387 4.5 37.0 1.0
CA A:PRO388 4.7 36.7 1.0
O A:ARG390 4.8 36.8 1.0
CG A:PRO388 4.9 36.6 1.0
O A:PHE389 4.9 35.2 1.0
O A:GLY354 5.0 36.8 1.0

Chlorine binding site 2 out of 8 in 3c50

Go back to Chlorine Binding Sites List in 3c50
Chlorine binding site 2 out of 8 in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl567

b:38.4
occ:1.00
 O A:HOH646 3.2 21.6 1.0
N A:PHE143 3.2 42.1 1.0
CA A:PHE143 3.4 41.5 1.0
N A:LEU146 3.5 37.1 1.0
CB A:LEU146 3.6 36.2 1.0
CD A:PRO145 3.6 38.7 1.0
CB A:ALA134 3.7 39.8 1.0
CA A:ALA134 3.8 40.4 1.0
CB A:PRO145 4.0 38.6 1.0
C A:PHE143 4.0 41.1 1.0
CG A:PRO145 4.0 38.2 1.0
CA A:LEU146 4.1 36.6 1.0
N A:PRO145 4.1 38.8 1.0
N A:GLN144 4.2 41.1 1.0
C A:PRO145 4.3 37.8 1.0
N A:ALA134 4.3 40.1 1.0
CD2 A:PHE143 4.3 39.0 1.0
CA A:PRO145 4.4 38.5 1.0
C A:LEU142 4.4 43.1 1.0
CD1 A:LEU142 4.7 42.4 1.0
O A:PHE143 4.7 41.1 1.0
CB A:PHE143 4.8 41.1 1.0
CA A:LEU142 4.8 43.6 1.0
CG A:LEU146 4.8 36.3 1.0
C A:ARG133 4.9 39.6 1.0
C A:GLN144 4.9 39.9 1.0
CD2 A:LEU146 5.0 35.2 1.0
O A:ARG133 5.0 39.3 1.0
O A:GLY141 5.0 44.6 1.0

Chlorine binding site 3 out of 8 in 3c50

Go back to Chlorine Binding Sites List in 3c50
Chlorine binding site 3 out of 8 in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl569

b:41.7
occ:1.00
 N A:GLY139 3.3 46.6 1.0
N A:ALA138 3.6 45.8 1.0
CA A:GLY137 3.6 44.4 1.0
C A:GLY137 3.8 45.1 1.0
CA A:GLY139 3.9 46.7 1.0
CD1 A:LEU142 4.0 42.4 1.0
O A:ALA136 4.1 42.8 1.0
CB A:LEU142 4.2 43.3 1.0
C A:ALA138 4.3 46.5 1.0
CA A:LEU142 4.4 43.6 1.0
N A:LEU142 4.4 44.0 1.0
CA A:ALA138 4.4 46.1 1.0
C A:GLY139 4.5 46.9 1.0
O A:HOH720 4.6 47.5 1.0
O A:GLY139 4.6 47.0 1.0
CG A:LEU142 4.6 43.5 1.0
O A:GLY137 4.7 45.2 1.0
N A:GLY137 4.7 43.9 1.0
C A:ALA136 4.8 43.2 1.0

Chlorine binding site 4 out of 8 in 3c50

Go back to Chlorine Binding Sites List in 3c50
Chlorine binding site 4 out of 8 in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl565

b:41.1
occ:1.00
 N A:LEU166 3.3 29.9 1.0
NE2 B:GLN173 3.4 26.6 1.0
O A:HOH644 3.4 32.6 1.0
NH2 B:ARG170 3.5 32.0 1.0
CB A:SER165 3.7 30.5 1.0
CG A:LEU166 3.8 28.9 1.0
CB A:LEU166 3.8 29.6 1.0
CA A:SER165 3.9 30.1 1.0
C A:SER165 4.1 29.7 1.0
CA A:LEU166 4.1 29.9 1.0
CD B:GLN173 4.3 28.5 1.0
OE1 B:GLN173 4.3 26.7 1.0
CD1 A:LEU166 4.4 25.6 1.0
CD1 A:TYR167 4.5 32.5 1.0
CE1 A:TYR167 4.5 31.3 1.0
CZ B:ARG170 4.6 31.3 1.0
OG A:SER165 4.8 30.2 1.0
N A:TYR167 4.9 30.4 1.0
NE B:ARG170 5.0 31.2 1.0

Chlorine binding site 5 out of 8 in 3c50

Go back to Chlorine Binding Sites List in 3c50
Chlorine binding site 5 out of 8 in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl566

b:46.7
occ:1.00
 N B:LEU166 3.3 28.6 1.0
NE2 A:GLN173 3.5 24.9 1.0
O B:HOH639 3.7 37.6 1.0
CB B:SER165 3.8 28.6 1.0
CG B:LEU166 3.8 28.0 1.0
CA B:SER165 3.8 28.7 1.0
CB B:LEU166 4.0 28.3 1.0
C B:SER165 4.1 28.6 1.0
CD1 B:LEU166 4.3 27.6 1.0
CA B:LEU166 4.3 28.6 1.0
NH2 A:ARG170 4.4 35.4 1.0
CD A:GLN173 4.4 28.2 1.0
OE1 A:GLN173 4.4 28.6 1.0
CE1 B:TYR167 4.8 29.0 1.0
CD1 B:TYR167 4.8 28.7 1.0
OG B:SER165 4.8 27.8 1.0

Chlorine binding site 6 out of 8 in 3c50

Go back to Chlorine Binding Sites List in 3c50
Chlorine binding site 6 out of 8 in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl567

b:33.3
occ:1.00
 NE B:ARG390 3.1 35.5 1.0
O B:HOH626 3.1 33.6 1.0
N B:PHE389 3.2 35.4 1.0
N B:ARG390 3.4 35.5 1.0
CA B:GLY387 3.5 35.9 1.0
C B:GLY387 3.5 35.4 1.0
O B:HOH701 3.6 28.4 1.0
NH2 B:ARG390 3.6 35.9 1.0
N B:PRO388 3.7 35.1 1.0
CB B:PHE389 3.7 35.6 1.0
CA B:PHE389 3.7 35.5 1.0
CZ B:ARG390 3.8 35.5 1.0
CB B:ARG390 3.9 35.3 1.0
C B:PHE389 3.9 35.4 1.0
CD B:PRO388 3.9 35.2 1.0
CG B:ARG390 3.9 35.0 1.0
O B:GLY387 4.0 35.5 1.0
CD B:ARG390 4.1 35.5 1.0
CD1 B:PHE389 4.2 36.1 1.0
CA B:ARG390 4.2 35.6 1.0
O B:HOH656 4.3 39.6 1.0
C B:PRO388 4.3 35.4 1.0
N B:GLY387 4.4 36.1 1.0
CG B:PHE389 4.4 35.9 1.0
CA B:PRO388 4.6 35.4 1.0
O B:ARG390 4.7 36.5 1.0
CG B:PRO388 4.8 35.2 1.0
O B:PHE389 4.8 35.2 1.0
C B:ARG390 5.0 35.9 1.0
CD1 B:LEU401 5.0 39.0 1.0

Chlorine binding site 7 out of 8 in 3c50

Go back to Chlorine Binding Sites List in 3c50
Chlorine binding site 7 out of 8 in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl568

b:52.3
occ:1.00
 N B:PHE143 3.2 43.0 1.0
CA B:PHE143 3.4 42.3 1.0
N B:LEU146 3.4 37.7 1.0
CD B:PRO145 3.5 39.7 1.0
CB B:ALA134 3.6 43.6 1.0
CB B:PRO145 3.7 39.3 1.0
CA B:ALA134 3.7 43.8 1.0
CG B:PRO145 3.7 39.5 1.0
CB B:LEU146 3.8 36.9 1.0
C B:PHE143 3.9 41.8 1.0
N B:PRO145 4.0 39.6 1.0
N B:GLN144 4.2 41.5 1.0
N B:ALA134 4.2 43.5 1.0
CA B:LEU146 4.2 37.0 1.0
C B:PRO145 4.2 38.9 1.0
CA B:PRO145 4.2 39.2 1.0
C B:LEU142 4.4 44.3 1.0
CD2 B:PHE143 4.5 39.2 1.0
O B:PHE143 4.5 41.7 1.0
C B:ARG133 4.6 43.3 1.0
O B:ARG133 4.6 43.5 1.0
CD1 B:LEU142 4.6 46.0 1.0
NE B:ARG133 4.7 45.9 1.0
CB B:PHE143 4.7 41.3 1.0
CD B:ARG133 4.8 44.5 1.0
CA B:LEU142 4.9 44.9 1.0
C B:GLN144 4.9 40.3 1.0
O B:GLY141 4.9 46.4 1.0
C B:ALA134 5.0 43.9 1.0

Chlorine binding site 8 out of 8 in 3c50

Go back to Chlorine Binding Sites List in 3c50
Chlorine binding site 8 out of 8 in the Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of G Protein Coupled Receptor Kinase 1 Bound to Adp and Magnesium Chloride at 2.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl569

b:42.4
occ:1.00
 NH1 B:ARG390 3.1 36.4 1.0
N B:VAL396 3.3 35.5 1.0
CA B:LYS395 3.6 35.6 1.0
O B:VAL396 3.8 35.4 1.0
C B:LYS395 3.9 35.4 1.0
CD B:ARG390 4.1 35.5 1.0
CB B:LYS395 4.1 35.6 1.0
O B:GLU394 4.2 35.2 1.0
CG2 B:VAL396 4.3 34.4 1.0
CZ B:ARG390 4.3 35.5 1.0
CG B:LYS395 4.3 36.2 1.0
CA B:VAL396 4.3 35.8 1.0
C B:VAL396 4.5 36.0 1.0
NE B:ARG390 4.7 35.5 1.0
N B:LYS395 4.7 35.8 1.0
O B:HOH658 4.8 41.5 1.0
C B:GLU394 4.9 35.9 1.0
CD2 B:LEU401 4.9 37.5 1.0
CB B:VAL396 4.9 35.5 1.0

Reference:

P.Singh, B.Wang, T.Maeda, K.Palczewski, J.J.Tesmer. Structures of Rhodopsin Kinase in Different Ligand States Reveal Key Elements Involved in G Protein-Coupled Receptor Kinase Activation. J.Biol.Chem. V. 283 14053 2008.
ISSN: ISSN 0021-9258
PubMed: 18339619
DOI: 10.1074/JBC.M708974200
Page generated: Sat Jul 20 16:51:18 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy