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Chlorine in PDB 3cj8: Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583

Enzymatic activity of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583

All present enzymatic activity of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583:
2.3.1.89;

Protein crystallography data

The structure of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583, PDB code: 3cj8 was solved by K.Tan, L.Bigelow, S.Clancy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.83 / 1.95
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 95.209, 55.179, 140.387, 90.00, 95.63, 90.00
R / Rfree (%) 20.1 / 24.8

Other elements in 3cj8:

The structure of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 (pdb code 3cj8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583, PDB code: 3cj8:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 1 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:23.9
occ:1.00
 N A:GLY135 3.1 29.4 1.0
O B:HOH391 3.2 25.3 1.0
ND2 A:ASN116 3.2 28.8 1.0
CA A:GLY153 3.6 30.9 1.0
O A:HOH365 3.7 30.1 1.0
CA A:GLY134 3.8 29.9 1.0
CE B:MSE129 3.8 29.6 1.0
C A:GLY134 4.0 29.3 1.0
CA A:GLY135 4.0 29.4 1.0
N A:GLY153 4.2 31.0 1.0
C A:GLY153 4.3 30.7 1.0
CG A:ASN116 4.3 29.6 1.0
O A:HOH386 4.5 30.1 1.0
CB A:ASN116 4.6 27.0 1.0
O A:GLY153 4.8 30.3 1.0
N A:VAL154 4.8 30.6 1.0
CG1 A:ILE155 4.8 31.2 1.0

Chlorine binding site 2 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 2 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl307

b:41.2
occ:1.00
 NH1 B:ARG90 3.0 27.5 1.0
NH1 A:ARG98 3.1 29.7 1.0
O A:HOH386 3.1 30.1 1.0
NH2 A:ARG98 3.2 29.3 1.0
O A:HOH478 3.2 42.2 1.0
SE B:MSE110 3.6 40.0 0.8
NH2 B:ARG90 3.6 28.6 1.0
CZ A:ARG98 3.6 29.4 1.0
CZ B:ARG90 3.7 29.2 1.0
CE B:MSE110 3.8 36.5 1.0
O B:HOH335 4.6 29.2 1.0
CD1 A:ILE79 4.6 22.9 0.5
CE B:MSE126 4.7 42.9 1.0
OE1 B:GLU92 4.7 29.8 1.0
NE A:ARG98 4.9 26.4 1.0

Chlorine binding site 3 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 3 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:25.2
occ:1.00
 N B:GLY135 3.1 28.7 1.0
ND2 B:ASN116 3.2 29.1 1.0
O C:HOH359 3.3 24.4 1.0
O B:HOH374 3.6 29.3 1.0
CA B:GLY153 3.6 31.4 1.0
CA B:GLY134 3.9 28.7 1.0
C B:GLY134 4.0 28.9 1.0
CE C:MSE129 4.0 30.9 1.0
CA B:GLY135 4.0 30.1 1.0
C B:GLY153 4.3 31.1 1.0
N B:GLY153 4.3 31.3 1.0
CG B:ASN116 4.3 29.6 1.0
O C:HOH484 4.4 29.0 1.0
O B:HOH466 4.6 31.5 1.0
O B:HOH360 4.6 24.0 1.0
CB B:ASN116 4.6 28.2 1.0
N B:VAL154 4.7 30.7 1.0
CG1 B:ILE155 4.8 34.5 1.0
O B:GLY153 4.8 30.6 1.0

Chlorine binding site 4 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 4 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl305

b:35.9
occ:1.00
 NH1 B:ARG98 3.0 30.8 1.0
NH1 C:ARG90 3.0 28.5 1.0
NH2 B:ARG98 3.1 27.9 1.0
O B:HOH466 3.1 31.5 1.0
O B:HOH360 3.1 24.0 1.0
CZ B:ARG98 3.5 30.2 1.0
SE C:MSE110 3.6 35.8 0.8
CE C:MSE110 3.7 35.9 1.0
NH2 C:ARG90 3.8 25.8 1.0
CZ C:ARG90 3.8 29.5 1.0
O C:HOH367 4.2 26.4 1.0
CD1 B:ILE79 4.3 26.0 1.0
OE1 C:GLU92 4.7 28.8 1.0
NE B:ARG98 4.8 24.7 1.0

Chlorine binding site 5 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 5 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl303

b:25.8
occ:1.00
 N C:GLY135 3.0 27.6 1.0
ND2 C:ASN116 3.1 29.5 1.0
O A:HOH353 3.3 25.1 1.0
O C:HOH342 3.5 28.8 1.0
CA C:GLY153 3.6 31.9 1.0
CA C:GLY134 3.7 27.8 1.0
CE A:MSE129 3.8 28.4 1.0
C C:GLY134 3.8 28.0 1.0
CA C:GLY135 4.0 28.1 1.0
CG C:ASN116 4.3 30.6 1.0
N C:GLY153 4.3 31.9 1.0
C C:GLY153 4.3 31.5 1.0
CB C:ASN116 4.5 28.6 1.0
O C:HOH464 4.7 30.8 1.0
CG1 C:ILE155 4.8 32.9 1.0
O C:GLY153 4.8 31.3 1.0
O A:HOH321 4.8 22.9 1.0
N C:VAL154 4.8 31.3 1.0

Chlorine binding site 6 out of 6 in 3cj8

Go back to Chlorine Binding Sites List in 3cj8
Chlorine binding site 6 out of 6 in the Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N- Succinyltransferase From Enterococcus Faecalis V583 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl306

b:37.3
occ:1.00
 NH1 A:ARG90 3.0 25.8 1.0
O A:HOH321 3.1 22.9 1.0
O A:HOH395 3.1 37.3 1.0
NH1 C:ARG98 3.2 27.7 1.0
NH2 C:ARG98 3.3 26.0 1.0
NH2 A:ARG90 3.6 27.6 1.0
SE A:MSE110 3.6 39.0 0.8
CZ A:ARG90 3.7 27.1 1.0
CZ C:ARG98 3.7 27.5 1.0
CE A:MSE110 3.9 36.5 1.0
O A:HOH333 4.0 26.7 1.0
CD1 C:ILE79 4.4 25.1 1.0
OE1 A:GLU92 4.7 28.3 1.0
NE A:ARG90 5.0 24.9 1.0

Reference:

K.Tan, L.Bigelow, S.Clancy, A.Joachimiak. The Crystal Structure of 2,3,4,5-Tetrahydropyridine-2-Carboxylate N-Succinyltransferase From Enterococcus Faecalis V583. To Be Published.
Page generated: Fri Jul 11 04:03:24 2025

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