Chlorine in PDB 3d2o: Crystal Structure of Manganese-Metallated Gtp Cyclohydrolase Type Ib

Enzymatic activity of Crystal Structure of Manganese-Metallated Gtp Cyclohydrolase Type Ib

All present enzymatic activity of Crystal Structure of Manganese-Metallated Gtp Cyclohydrolase Type Ib:
3.5.4.16;

Protein crystallography data

The structure of Crystal Structure of Manganese-Metallated Gtp Cyclohydrolase Type Ib, PDB code: 3d2o was solved by M.A.Swairjo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	30.33 / 2.04
*Space group*	C 2 2 2₁
*Cell size a, b, c (Å), α, β, γ (°)*	92.225, 100.420, 113.947, 90.00, 90.00, 90.00
*R / R_free (%)*	18.5 / 26.4

Other elements in 3d2o:

The structure of Crystal Structure of Manganese-Metallated Gtp Cyclohydrolase Type Ib also contains other interesting chemical elements:

Manganese

(Mn)

2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Manganese-Metallated Gtp Cyclohydrolase Type Ib (pdb code 3d2o). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Manganese-Metallated Gtp Cyclohydrolase Type Ib, PDB code: 3d2o:

Chlorine binding site 1 out of 1 in 3d2o

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Chlorine Binding Sites List in 3d2o

Chlorine binding site 1 out of 1 in the Crystal Structure of Manganese-Metallated Gtp Cyclohydrolase Type Ib

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Manganese-Metallated Gtp Cyclohydrolase Type Ib within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
B:Cl260 b:65.3 occ:1.00	O	B:ASP121	3.8	24.6	1.0
	CG	B:LYS138	3.9	32.4	1.0
	C	B:ASP121	4.1	23.2	1.0
	O	B:LYS138	4.2	25.2	1.0
	O	B:HOH386	4.2	30.4	1.0
	CD	B:LYS138	4.3	32.2	1.0
	CB	B:LYS138	4.3	27.4	1.0
	CB	B:ASP121	4.3	24.8	1.0
	N	B:MET140	4.3	23.4	1.0
	N	B:SER123	4.4	23.5	1.0
	C	B:LYS138	4.4	26.6	1.0
	CB	B:MET140	4.5	22.8	1.0
	C	B:VAL122	4.5	23.6	1.0
	N	B:VAL122	4.5	22.8	1.0
	OG	B:SER123	4.5	33.5	1.0
	O	B:HOH366	4.5	33.4	1.0
	CB	B:SER123	4.5	27.4	1.0
	CA	B:VAL122	4.6	22.8	1.0
	N	B:VAL139	4.6	25.9	1.0
	C	B:VAL139	4.7	23.7	1.0
	CA	B:VAL139	4.8	24.1	1.0
	CG2	B:THR166	4.8	24.6	1.0
	O	B:VAL122	4.9	22.5	1.0
	CA	B:ASP121	4.9	23.8	1.0

Reference:

B.Sankaran, S.A.Bonnett, K.Shah, S.Gabriel, R.Reddy, P.Schimmel, D.A.Rodionov, V.De Crecy-Lagard, J.D.Helmann, D.Iwata-Reuyl, M.A.Swairjo. Zinc-Independent Folate Biosynthesis: Genetic, Biochemical, and Structural Investigations Reveal New Metal Dependence For Gtp Cyclohydrolase Ib J.Bacteriol. V. 191 6936 2009.
ISSN: ISSN 0021-9193
PubMed: 19767425
DOI: 10.1128/JB.00287-09

Page generated: Fri Jul 11 04:20:57 2025

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