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Chlorine in PDB 3dn1: Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant

Enzymatic activity of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant

All present enzymatic activity of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant:
3.2.1.17;

Protein crystallography data

The structure of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant, PDB code: 3dn1 was solved by L.Liu, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.55 / 1.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 59.864, 59.864, 95.501, 90.00, 90.00, 120.00
R / Rfree (%) 19 / 22

Other elements in 3dn1:

The structure of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant also contains other interesting chemical elements:

Fluorine (F) 30 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant (pdb code 3dn1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant, PDB code: 3dn1:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 3dn1

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Chlorine binding site 1 out of 7 in the Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl903

b:60.5
occ:1.00
O A:HOH1088 3.1 29.1 1.0
CE A:LYS43 3.8 14.3 0.6
CA A:GLY56 4.1 18.3 1.0
CB A:ILE17 4.2 13.8 1.0
CD1 A:ILE17 4.4 14.5 1.0
O A:GLY56 4.4 16.6 1.0
NZ A:LYS43 4.5 16.1 0.6
CD1 A:LEU39 4.5 19.2 1.0
C A:GLY56 4.6 17.4 1.0
CG1 A:ILE17 4.6 13.7 1.0
CD2 A:LEU39 4.7 19.0 1.0
O A:ASN55 4.7 21.1 1.0
N A:ILE17 4.8 14.3 1.0
O A:ILE17 5.0 14.1 1.0
N A:GLY56 5.0 19.5 1.0
CG2 A:ILE17 5.0 12.7 1.0

Chlorine binding site 2 out of 7 in 3dn1

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Chlorine binding site 2 out of 7 in the Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl900

b:14.7
occ:0.15
CL1 A:BCF900 0.0 14.7 0.1
F5 A:BCF900 0.6 42.9 0.1
F4 A:BCF900 0.7 8.1 0.1
F3 A:BCF900 0.8 50.7 0.1
F2 A:BCF900 0.8 40.6 0.1
F6 A:BCF900 0.9 57.5 0.1
C4 A:BCF900 1.5 8.0 0.1
C5 A:BCF900 1.6 42.9 0.1
C3 A:BCF900 1.7 50.6 0.1
C1 A:BCF900 1.8 14.7 0.1
C2 A:BCF900 1.9 40.6 0.1
C6 A:BCF900 1.9 57.5 0.1
C3 A:BCF900 2.4 8.0 0.1
C5 A:BCF900 2.5 8.0 0.1
C6 A:BCF900 2.5 42.9 0.1
C4 A:BCF900 2.6 42.9 0.1
C2 A:BCF900 2.6 50.6 0.1
C1 A:BCF900 2.6 40.6 0.1
C4 A:BCF900 2.7 50.6 0.1
F3 A:BCF900 2.7 8.0 0.1
C6 A:BCF900 2.7 14.8 0.1
CL1 A:BCF900 2.8 40.6 0.1
C2 A:BCF900 2.8 14.8 0.1
F6 A:BCF900 2.8 42.8 0.1
C1 A:BCF900 2.8 57.5 0.1
F5 A:BCF900 2.9 7.8 0.1
F4 A:BCF900 2.9 42.9 0.1
F2 A:BCF900 2.9 50.6 0.1
C5 A:BCF900 2.9 57.5 0.1
F6 A:BCF900 2.9 14.8 0.1
CG2 A:VAL111 2.9 31.1 1.0
F4 A:BCF900 3.0 50.6 0.1
F2 A:BCF900 3.0 14.8 0.1
C3 A:BCF900 3.1 40.6 0.1
F5 A:BCF900 3.1 57.5 0.1
CL1 A:BCF900 3.2 57.5 0.1
F3 A:BCF900 3.4 40.6 0.1
SD A:MET102 3.5 14.6 1.0
CE A:MET102 3.6 14.7 1.0
C2 A:BCF900 3.6 7.9 0.1
C6 A:BCF900 3.7 8.0 0.1
C1 A:BCF900 3.8 42.9 0.1
C3 A:BCF900 3.8 42.8 0.1
C1 A:BCF900 3.9 50.6 0.1
C5 A:BCF900 3.9 50.6 0.1
CB A:PHE114 4.0 21.0 1.0
C6 A:BCF900 4.0 40.6 0.1
C5 A:BCF900 4.0 14.7 0.1
C3 A:BCF900 4.1 14.8 0.1
C2 A:BCF900 4.1 57.5 0.1
C1 A:BCF900 4.1 8.0 0.1
CG A:PHE114 4.1 20.3 1.0
C4 A:BCF900 4.2 57.4 0.1
C4 A:BCF900 4.3 40.6 0.1
C2 A:BCF900 4.3 42.9 0.1
CB A:VAL111 4.3 30.6 1.0
C6 A:BCF900 4.4 50.6 0.1
CD2 A:LEU118 4.4 18.1 1.0
CB A:MET102 4.4 11.7 1.0
CD1 A:PHE114 4.5 20.7 1.0
C4 A:BCF900 4.6 14.7 0.1
C5 A:BCF900 4.6 40.6 0.1
CD2 A:PHE114 4.6 18.6 1.0
C3 A:BCF900 4.6 57.5 0.1
CG1 A:VAL111 4.6 31.3 1.0
F2 A:BCF900 4.7 7.9 0.1
CG A:MET102 4.7 12.6 1.0
CG A:LEU118 4.8 16.6 1.0
F6 A:BCF900 4.8 8.0 0.1
F3 A:BCF900 4.9 42.8 0.1
F6 A:BCF900 4.9 40.6 0.1
O A:VAL111 5.0 30.0 1.0
F5 A:BCF900 5.0 50.6 0.1

Chlorine binding site 3 out of 7 in 3dn1

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Chlorine binding site 3 out of 7 in the Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl900

b:57.5
occ:0.13
CL1 A:BCF900 0.0 57.5 0.1
F2 A:BCF900 0.4 14.8 0.1
F4 A:BCF900 0.4 50.6 0.1
F3 A:BCF900 0.4 40.6 0.1
F6 A:BCF900 0.5 42.8 0.1
F5 A:BCF900 0.6 7.8 0.1
C4 A:BCF900 1.3 50.6 0.1
C5 A:BCF900 1.4 8.0 0.1
C3 A:BCF900 1.5 40.6 0.1
C6 A:BCF900 1.6 42.9 0.1
C2 A:BCF900 1.6 14.8 0.1
C1 A:BCF900 1.8 57.5 0.1
C6 A:BCF900 2.1 8.0 0.1
C5 A:BCF900 2.1 50.6 0.1
C2 A:BCF900 2.3 40.6 0.1
F6 A:BCF900 2.3 8.0 0.1
C1 A:BCF900 2.4 42.9 0.1
F5 A:BCF900 2.4 50.6 0.1
C3 A:BCF900 2.5 50.6 0.1
F2 A:BCF900 2.5 40.6 0.1
C4 A:BCF900 2.6 8.0 0.1
C3 A:BCF900 2.6 14.8 0.1
C1 A:BCF900 2.6 14.7 0.1
C4 A:BCF900 2.7 40.6 0.1
C5 A:BCF900 2.7 42.9 0.1
C6 A:BCF900 2.7 57.5 0.1
CL1 A:BCF900 2.7 42.8 0.1
C2 A:BCF900 2.8 57.5 0.1
F3 A:BCF900 2.9 14.7 0.1
F6 A:BCF900 3.0 57.5 0.1
F3 A:BCF900 3.0 50.7 0.1
F2 A:BCF900 3.0 57.5 0.1
F4 A:BCF900 3.1 8.1 0.1
F4 A:BCF900 3.1 40.6 0.1
F5 A:BCF900 3.1 42.9 0.1
CL1 A:BCF900 3.2 14.7 0.1
CG2 A:VAL103 3.3 13.1 1.0
C1 A:BCF900 3.4 8.0 0.1
C6 A:BCF900 3.4 50.6 0.1
CG1 A:VAL111 3.5 31.3 1.0
CD2 A:LEU84 3.5 20.7 1.0
CG2 A:VAL111 3.6 31.1 1.0
C1 A:BCF900 3.6 40.6 0.1
C2 A:BCF900 3.6 50.6 0.1
CD1 A:LEU84 3.7 20.0 1.0
C2 A:BCF900 3.7 42.9 0.1
C3 A:BCF900 3.7 8.0 0.1
C5 A:BCF900 3.9 40.6 0.1
C4 A:BCF900 3.9 14.7 0.1
C6 A:BCF900 3.9 14.8 0.1
C4 A:BCF900 3.9 42.9 0.1
C1 A:BCF900 4.0 50.6 0.1
CB A:VAL111 4.0 30.6 1.0
C5 A:BCF900 4.0 57.5 0.1
C3 A:BCF900 4.1 57.5 0.1
C2 A:BCF900 4.1 7.9 0.1
CG A:LEU84 4.1 19.4 1.0
C6 A:BCF900 4.2 40.6 0.1
C3 A:BCF900 4.3 42.8 0.1
C5 A:BCF900 4.4 14.7 0.1
F6 A:BCF900 4.5 50.6 0.1
O A:ALA99 4.5 10.6 1.0
C4 A:BCF900 4.6 57.4 0.1
F2 A:BCF900 4.7 42.8 0.1
CB A:VAL103 4.7 12.6 1.0
F2 A:BCF900 4.8 50.6 0.1
CL1 A:BCF900 4.8 7.8 0.1
CB A:LEU84 4.8 18.8 1.0
F3 A:BCF900 4.9 8.0 0.1
N A:VAL103 4.9 12.3 1.0
CD2 A:LEU118 5.0 18.1 1.0
F4 A:BCF900 5.0 14.8 0.1
F6 A:BCF900 5.0 14.8 0.1
CL1 A:BCF900 5.0 40.6 0.1

Chlorine binding site 4 out of 7 in 3dn1

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Chlorine binding site 4 out of 7 in the Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl900

b:42.8
occ:0.13
CL1 A:BCF900 0.0 42.8 0.1
F3 A:BCF900 0.4 14.7 0.1
F5 A:BCF900 0.4 50.6 0.1
F6 A:BCF900 0.4 8.0 0.1
F4 A:BCF900 0.6 40.6 0.1
F2 A:BCF900 0.7 57.5 0.1
C4 A:BCF900 1.4 40.6 0.1
C5 A:BCF900 1.5 50.6 0.1
C3 A:BCF900 1.6 14.8 0.1
C6 A:BCF900 1.7 8.0 0.1
C2 A:BCF900 1.8 57.5 0.1
C1 A:BCF900 1.8 42.9 0.1
C3 A:BCF900 2.2 40.6 0.1
C6 A:BCF900 2.3 50.6 0.1
F3 A:BCF900 2.4 40.6 0.1
C1 A:BCF900 2.5 57.5 0.1
C2 A:BCF900 2.5 14.8 0.1
F6 A:BCF900 2.5 50.6 0.1
C1 A:BCF900 2.5 8.0 0.1
C4 A:BCF900 2.6 50.6 0.1
C5 A:BCF900 2.6 40.6 0.1
F2 A:BCF900 2.7 14.8 0.1
C4 A:BCF900 2.7 14.7 0.1
CL1 A:BCF900 2.7 57.5 0.1
C2 A:BCF900 2.8 42.9 0.1
C6 A:BCF900 2.8 42.9 0.1
C5 A:BCF900 2.8 8.0 0.1
CL1 A:BCF900 2.9 7.8 0.1
C3 A:BCF900 2.9 57.5 0.1
F2 A:BCF900 3.0 42.8 0.1
F6 A:BCF900 3.0 42.8 0.1
F4 A:BCF900 3.1 50.6 0.1
F4 A:BCF900 3.1 14.8 0.1
F5 A:BCF900 3.1 40.6 0.1
F5 A:BCF900 3.2 7.8 0.1
F3 A:BCF900 3.3 57.4 0.1
CG1 A:ILE78 3.5 16.9 1.0
C2 A:BCF900 3.5 40.6 0.1
CB A:LEU84 3.6 18.8 1.0
C1 A:BCF900 3.6 50.6 0.1
CD1 A:LEU84 3.6 20.0 1.0
CG2 A:ILE78 3.7 16.1 1.0
CD1 A:ILE78 3.7 16.8 1.0
CD2 A:LEU84 3.8 20.7 1.0
C6 A:BCF900 3.8 40.6 0.1
C1 A:BCF900 3.8 14.7 0.1
C6 A:BCF900 3.8 57.5 0.1
C3 A:BCF900 3.8 50.6 0.1
CG A:LEU84 3.8 19.4 1.0
C2 A:BCF900 3.9 7.9 0.1
CG2 A:VAL103 3.9 13.1 1.0
C5 A:BCF900 4.0 14.7 0.1
C4 A:BCF900 4.0 8.0 0.1
C3 A:BCF900 4.0 42.8 0.1
C5 A:BCF900 4.1 42.9 0.1
C4 A:BCF900 4.1 57.4 0.1
C1 A:BCF900 4.1 40.6 0.1
CB A:ILE78 4.2 16.8 1.0
C2 A:BCF900 4.2 50.6 0.1
CB A:ALA99 4.2 11.0 1.0
C6 A:BCF900 4.4 14.8 0.1
C5 A:BCF900 4.4 57.5 0.1
CA A:LEU84 4.5 18.5 1.0
C3 A:BCF900 4.5 8.0 0.1
O A:LEU84 4.5 16.8 1.0
F2 A:BCF900 4.5 40.6 0.1
O A:ALA99 4.5 10.6 1.0
C4 A:BCF900 4.6 42.9 0.1
C A:LEU84 4.8 17.6 1.0
F6 A:BCF900 4.8 57.5 0.1
C A:ALA99 4.9 10.5 1.0
CA A:ALA99 4.9 10.7 1.0
F2 A:BCF900 4.9 7.9 0.1
CB A:TYR88 4.9 14.7 1.0
F3 A:BCF900 5.0 50.7 0.1
F6 A:BCF900 5.0 40.6 0.1
CA A:ILE78 5.0 16.9 1.0
CD1 A:TYR88 5.0 15.5 1.0

Chlorine binding site 5 out of 7 in 3dn1

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Chlorine binding site 5 out of 7 in the Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl900

b:7.8
occ:0.13
CL1 A:BCF900 0.0 7.8 0.1
F5 A:BCF900 0.3 40.6 0.1
F6 A:BCF900 0.4 50.6 0.1
F4 A:BCF900 0.5 14.8 0.1
F3 A:BCF900 0.5 57.4 0.1
F2 A:BCF900 0.5 42.8 0.1
C5 A:BCF900 1.3 40.6 0.1
C3 A:BCF900 1.3 57.5 0.1
C4 A:BCF900 1.4 14.7 0.1
C6 A:BCF900 1.6 50.6 0.1
C2 A:BCF900 1.7 42.9 0.1
C1 A:BCF900 1.8 8.0 0.1
C2 A:BCF900 2.1 57.5 0.1
C4 A:BCF900 2.2 40.6 0.1
C3 A:BCF900 2.2 14.8 0.1
F2 A:BCF900 2.3 57.5 0.1
C1 A:BCF900 2.4 50.6 0.1
C6 A:BCF900 2.5 40.6 0.1
F4 A:BCF900 2.5 40.6 0.1
F3 A:BCF900 2.5 14.7 0.1
C5 A:BCF900 2.5 14.7 0.1
C1 A:BCF900 2.5 42.9 0.1
C4 A:BCF900 2.6 57.4 0.1
C5 A:BCF900 2.7 50.6 0.1
C2 A:BCF900 2.8 7.9 0.1
C6 A:BCF900 2.8 8.0 0.1
C3 A:BCF900 2.8 42.8 0.1
CL1 A:BCF900 2.8 50.6 0.1
CL1 A:BCF900 2.9 42.8 0.1
F6 A:BCF900 2.9 40.6 0.1
F2 A:BCF900 3.0 7.9 0.1
F5 A:BCF900 3.0 14.7 0.1
F6 A:BCF900 3.0 8.0 0.1
F4 A:BCF900 3.1 57.5 0.1
F3 A:BCF900 3.1 42.8 0.1
F5 A:BCF900 3.1 50.6 0.1
N A:TYR88 3.4 14.4 1.0
C1 A:BCF900 3.4 57.5 0.1
C3 A:BCF900 3.5 40.6 0.1
C2 A:BCF900 3.5 14.8 0.1
CA A:TYR88 3.6 14.4 1.0
CB A:ALA99 3.6 11.0 1.0
C1 A:BCF900 3.7 40.6 0.1
C6 A:BCF900 3.7 14.8 0.1
CB A:TYR88 3.7 14.7 1.0
C5 A:BCF900 3.7 57.5 0.1
C2 A:BCF900 3.8 50.6 0.1
O A:LEU84 3.8 16.8 1.0
C6 A:BCF900 3.9 42.9 0.1
C4 A:BCF900 3.9 50.6 0.1
CB A:VAL87 4.0 15.4 1.0
C A:VAL87 4.0 14.9 1.0
CG1 A:VAL87 4.0 15.2 1.0
C4 A:BCF900 4.0 42.9 0.1
C2 A:BCF900 4.0 40.6 0.1
C3 A:BCF900 4.1 8.0 0.1
C5 A:BCF900 4.1 8.0 0.1
C6 A:BCF900 4.1 57.5 0.1
C1 A:BCF900 4.1 14.7 0.1
CD1 A:LEU91 4.3 12.9 1.0
CD1 A:TYR88 4.3 15.5 1.0
CD2 A:LEU118 4.3 18.1 1.0
C3 A:BCF900 4.4 50.6 0.1
C5 A:BCF900 4.4 42.9 0.1
F3 A:BCF900 4.5 40.6 0.1
CG A:TYR88 4.5 14.6 1.0
C4 A:BCF900 4.6 8.0 0.1
CA A:VAL87 4.6 14.9 1.0
F2 A:BCF900 4.6 14.8 0.1
O A:VAL87 4.6 14.0 1.0
C A:LEU84 4.8 17.6 1.0
F2 A:BCF900 4.8 50.6 0.1
CA A:ALA99 4.8 10.7 1.0
CL1 A:BCF900 4.8 57.5 0.1
CG2 A:ILE78 4.8 16.1 1.0
F6 A:BCF900 4.9 14.8 0.1
F6 A:BCF900 4.9 42.8 0.1
F5 A:BCF900 4.9 57.5 0.1
CB A:LEU84 5.0 18.8 1.0
CA A:LEU84 5.0 18.5 1.0

Chlorine binding site 6 out of 7 in 3dn1

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Chlorine binding site 6 out of 7 in the Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl900

b:50.6
occ:0.13
CL1 A:BCF900 0.0 50.6 0.1
F5 A:BCF900 0.3 14.7 0.1
F4 A:BCF900 0.3 57.5 0.1
F6 A:BCF900 0.4 40.6 0.1
F3 A:BCF900 0.5 42.8 0.1
F2 A:BCF900 0.7 7.9 0.1
C4 A:BCF900 1.3 57.4 0.1
C5 A:BCF900 1.4 14.7 0.1
C6 A:BCF900 1.6 40.6 0.1
C3 A:BCF900 1.6 42.8 0.1
C1 A:BCF900 1.8 50.6 0.1
C2 A:BCF900 1.8 7.9 0.1
C3 A:BCF900 2.1 57.5 0.1
C4 A:BCF900 2.3 14.7 0.1
C2 A:BCF900 2.3 42.9 0.1
C5 A:BCF900 2.4 40.6 0.1
F2 A:BCF900 2.4 42.8 0.1
F3 A:BCF900 2.4 57.4 0.1
C5 A:BCF900 2.4 57.5 0.1
F4 A:BCF900 2.5 14.8 0.1
C6 A:BCF900 2.6 14.8 0.1
F5 A:BCF900 2.6 40.6 0.1
C1 A:BCF900 2.6 8.0 0.1
C1 A:BCF900 2.7 40.6 0.1
C2 A:BCF900 2.8 50.6 0.1
C6 A:BCF900 2.8 50.6 0.1
C4 A:BCF900 2.8 42.9 0.1
CL1 A:BCF900 2.8 7.8 0.1
F5 A:BCF900 2.9 57.5 0.1
C3 A:BCF900 3.0 8.0 0.1
F2 A:BCF900 3.0 50.6 0.1
F6 A:BCF900 3.0 50.6 0.1
F6 A:BCF900 3.0 14.8 0.1
F4 A:BCF900 3.3 42.9 0.1
F3 A:BCF900 3.3 8.0 0.1
CL1 A:BCF900 3.4 40.6 0.1
C2 A:BCF900 3.4 57.5 0.1
CD1 A:LEU91 3.5 12.9 1.0
CD1 A:LEU121 3.5 16.6 1.0
CE1 A:PHE153 3.6 13.2 1.0
C3 A:BCF900 3.6 14.8 0.1
CG1 A:VAL87 3.6 15.2 1.0
C6 A:BCF900 3.6 57.5 0.1
C1 A:BCF900 3.7 42.9 0.1
C4 A:BCF900 3.7 40.6 0.1
CZ A:PHE153 3.8 12.9 1.0
C1 A:BCF900 3.8 14.7 0.1
C6 A:BCF900 3.9 8.0 0.1
C2 A:BCF900 3.9 40.6 0.1
C5 A:BCF900 4.0 42.9 0.1
CB A:ALA99 4.0 11.0 1.0
C1 A:BCF900 4.0 57.5 0.1
C3 A:BCF900 4.1 50.6 0.1
C5 A:BCF900 4.1 50.6 0.1
C4 A:BCF900 4.2 8.0 0.1
C2 A:BCF900 4.2 14.8 0.1
CD2 A:LEU118 4.2 18.1 1.0
C6 A:BCF900 4.3 42.9 0.1
C3 A:BCF900 4.3 40.6 0.1
CB A:LEU121 4.5 14.2 1.0
F2 A:BCF900 4.5 57.5 0.1
C5 A:BCF900 4.5 8.0 0.1
CG A:LEU91 4.6 12.2 1.0
C4 A:BCF900 4.6 50.6 0.1
CB A:VAL87 4.6 15.4 1.0
CG A:LEU121 4.6 13.8 1.0
CD1 A:PHE153 4.6 12.5 1.0
F3 A:BCF900 4.6 14.7 0.1
CA A:ALA99 4.7 10.7 1.0
F4 A:BCF900 4.8 40.6 0.1
F6 A:BCF900 4.8 57.5 0.1
CD2 A:LEU91 4.9 12.3 1.0
F6 A:BCF900 4.9 8.0 0.1
CE2 A:PHE153 4.9 13.4 1.0

Chlorine binding site 7 out of 7 in 3dn1

Go back to Chlorine Binding Sites List in 3dn1
Chlorine binding site 7 out of 7 in the Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Chloropentafluorobenzene Binding in the Hydrophobic Cavity of T4 Lysozyme L99A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl900

b:40.6
occ:0.11
CL1 A:BCF900 0.0 40.6 0.1
F3 A:BCF900 0.2 8.0 0.1
F4 A:BCF900 0.2 42.9 0.1
F5 A:BCF900 0.5 57.5 0.1
F2 A:BCF900 0.5 50.6 0.1
F6 A:BCF900 0.5 14.8 0.1
C4 A:BCF900 1.4 42.9 0.1
C3 A:BCF900 1.5 8.0 0.1
C5 A:BCF900 1.6 57.5 0.1
C6 A:BCF900 1.6 14.8 0.1
C2 A:BCF900 1.7 50.6 0.1
C1 A:BCF900 1.8 40.6 0.1
C5 A:BCF900 2.3 42.9 0.1
C6 A:BCF900 2.3 57.5 0.1
C1 A:BCF900 2.4 14.7 0.1
F6 A:BCF900 2.5 57.5 0.1
C4 A:BCF900 2.5 8.0 0.1
C3 A:BCF900 2.5 42.8 0.1
C2 A:BCF900 2.5 7.9 0.1
C3 A:BCF900 2.6 50.6 0.1
F5 A:BCF900 2.6 42.9 0.1
F3 A:BCF900 2.7 50.7 0.1
C4 A:BCF900 2.7 57.4 0.1
C5 A:BCF900 2.7 14.7 0.1
C2 A:BCF900 2.8 40.6 0.1
CL1 A:BCF900 2.8 14.7 0.1
C6 A:BCF900 2.8 40.6 0.1
F4 A:BCF900 2.8 8.1 0.1
F2 A:BCF900 2.8 7.9 0.1
C1 A:BCF900 2.8 50.6 0.1
F3 A:BCF900 2.9 42.8 0.1
F2 A:BCF900 3.0 40.6 0.1
F6 A:BCF900 3.0 40.6 0.1
F5 A:BCF900 3.1 14.7 0.1
F4 A:BCF900 3.2 57.5 0.1
CL1 A:BCF900 3.4 50.6 0.1
SD A:MET102 3.4 14.6 1.0
CD1 A:LEU121 3.4 16.6 1.0
CZ A:PHE153 3.6 12.9 1.0
C6 A:BCF900 3.6 42.9 0.1
C1 A:BCF900 3.6 57.5 0.1
C2 A:BCF900 3.7 42.9 0.1
C5 A:BCF900 3.7 8.0 0.1
C1 A:BCF900 3.7 8.0 0.1
C2 A:BCF900 3.7 14.8 0.1
CE2 A:PHE153 3.8 13.4 1.0
C4 A:BCF900 3.9 50.6 0.1
C3 A:BCF900 3.9 57.5 0.1
C4 A:BCF900 3.9 14.7 0.1
CD2 A:LEU133 4.0 11.7 1.0
C3 A:BCF900 4.0 40.6 0.1
C6 A:BCF900 4.1 50.6 0.1
C5 A:BCF900 4.1 40.6 0.1
C1 A:BCF900 4.1 42.9 0.1
C6 A:BCF900 4.2 8.0 0.1
CD2 A:LEU118 4.3 18.1 1.0
C2 A:BCF900 4.3 57.5 0.1
CE A:MET102 4.3 14.7 1.0
C3 A:BCF900 4.3 14.8 0.1
CE1 A:PHE153 4.4 13.2 1.0
C5 A:BCF900 4.5 50.6 0.1
C4 A:BCF900 4.6 40.6 0.1
F6 A:BCF900 4.6 42.8 0.1
CD2 A:PHE153 4.7 12.5 1.0
F2 A:BCF900 4.8 14.8 0.1
F5 A:BCF900 4.8 7.8 0.1
F2 A:BCF900 4.8 42.8 0.1
CG A:LEU121 4.9 13.8 1.0
F4 A:BCF900 4.9 50.6 0.1
CG A:MET102 4.9 12.6 1.0
CG A:LEU118 4.9 16.6 1.0
CL1 A:BCF900 5.0 57.5 0.1

Reference:

L.Liu, W.A.Baase, B.W.Matthews. Halogenated Benzenes Bound Within A Non-Polar Cavity in T4 Lysozyme Provide Examples of I...S and I...Se Halogen-Bonding. J.Mol.Biol. V. 385 595 2009.
ISSN: ISSN 0022-2836
PubMed: 19014950
DOI: 10.1016/J.JMB.2008.10.086
Page generated: Sat Jul 20 18:23:20 2024

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