Atomistry » Chlorine » PDB 3ecg-3es1 » 3eo8
Atomistry »
  Chlorine »
    PDB 3ecg-3es1 »
      3eo8 »

Chlorine in PDB 3eo8: Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution

Protein crystallography data

The structure of Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution, PDB code: 3eo8 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.34 / 1.74
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 51.843, 183.265, 74.393, 90.00, 104.89, 90.00
R / Rfree (%) 15.6 / 19.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution (pdb code 3eo8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution, PDB code: 3eo8:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 3eo8

Go back to Chlorine Binding Sites List in 3eo8
Chlorine binding site 1 out of 6 in the Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:22.8
occ:1.00
 OG1 B:THR163 2.9 26.7 1.0
O A:HOH675 2.9 39.6 1.0
OG A:SER113 2.9 31.9 1.0
N A:SER113 3.1 29.1 1.0
CB A:SER113 3.5 29.8 1.0
O A:HOH781 3.6 15.4 1.0
C B:THR163 3.6 24.5 1.0
N B:SER164 3.6 25.1 1.0
O B:THR163 3.7 24.8 1.0
CB A:PRO112 3.7 26.8 1.0
CA B:SER164 3.7 24.9 1.0
CB B:THR163 3.9 25.6 1.0
CA A:SER113 3.9 28.9 1.0
CA A:PRO112 4.0 27.0 1.0
C A:PRO112 4.1 27.6 1.0
OH A:TYR110 4.1 30.7 1.0
CA B:THR163 4.2 24.8 1.0
CB B:SER164 4.4 25.2 1.0
CE2 A:TYR110 4.4 30.1 1.0
CG A:PRO136 4.6 27.0 1.0
O A:SER113 4.6 28.4 1.0
CB A:PRO136 4.7 25.2 1.0
N B:THR163 4.7 25.8 1.0
N5 B:FMN500 4.7 25.2 1.0
CZ A:TYR110 4.7 30.1 1.0
C A:SER113 4.8 28.7 1.0
O4 B:FMN500 4.9 25.7 1.0
CH3 A:ACT501 4.9 22.8 1.0
C B:SER164 5.0 25.3 1.0

Chlorine binding site 2 out of 6 in 3eo8

Go back to Chlorine Binding Sites List in 3eo8
Chlorine binding site 2 out of 6 in the Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl503

b:21.0
occ:1.00
 O B:HOH564 2.6 36.6 1.0
OG B:SER113 2.9 29.7 1.0
OG1 A:THR163 3.0 24.7 1.0
N B:SER113 3.1 28.1 1.0
CB B:SER113 3.5 27.9 1.0
O A:HOH783 3.6 14.5 1.0
C A:THR163 3.6 23.8 1.0
N A:SER164 3.6 23.2 1.0
CB B:PRO112 3.6 28.7 1.0
CA A:SER164 3.7 23.2 1.0
O A:THR163 3.8 25.3 1.0
CA B:SER113 3.9 27.9 1.0
OH B:TYR110 3.9 29.6 1.0
CB A:THR163 3.9 24.8 1.0
C B:PRO112 4.1 28.4 1.0
CA B:PRO112 4.1 28.5 1.0
CB A:SER164 4.2 24.1 1.0
CA A:THR163 4.3 24.3 1.0
CE2 B:TYR110 4.3 28.8 1.0
CG B:PRO136 4.6 26.1 1.0
CZ B:TYR110 4.6 28.6 1.0
CH3 B:ACT501 4.6 25.9 1.0
CB B:PRO136 4.7 25.9 1.0
O B:SER113 4.7 27.6 1.0
N A:THR163 4.7 25.1 1.0
N5 A:FMN500 4.8 26.9 1.0
C B:SER113 4.8 27.7 1.0
O4 A:FMN500 4.9 26.2 1.0
CG B:PRO112 4.9 27.2 1.0
C A:SER164 5.0 23.4 1.0

Chlorine binding site 3 out of 6 in 3eo8

Go back to Chlorine Binding Sites List in 3eo8
Chlorine binding site 3 out of 6 in the Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl502

b:19.3
occ:1.00
 O C:HOH754 2.7 40.8 1.0
OG1 D:THR163 3.0 24.7 1.0
OG C:SER113 3.1 27.8 0.5
N C:SER113 3.2 27.1 1.0
CB C:SER113 3.5 27.7 0.5
CB C:SER113 3.6 27.6 0.5
C D:THR163 3.6 23.8 1.0
OH C:TYR110 3.6 27.7 1.0
N D:SER164 3.7 24.0 1.0
O D:THR163 3.7 23.5 1.0
CA D:SER164 3.8 24.4 1.0
CB C:PRO112 3.8 28.1 1.0
O C:HOH781 3.8 14.7 1.0
CB D:THR163 3.9 24.1 1.0
CA C:SER113 4.0 27.2 0.5
CA C:SER113 4.0 27.3 0.5
CA C:PRO112 4.0 28.0 1.0
C C:PRO112 4.1 27.9 1.0
CE2 C:TYR110 4.1 25.9 1.0
CA D:THR163 4.3 23.8 1.0
CZ C:TYR110 4.3 28.5 1.0
NZ C:LYS40 4.3 37.3 1.0
CB D:SER164 4.4 24.6 1.0
CH3 C:ACT501 4.5 26.0 1.0
CG C:PRO136 4.7 25.1 1.0
N D:THR163 4.7 24.4 1.0
CB C:PRO136 4.8 24.7 1.0
N5 D:FMN500 4.8 27.8 1.0
O4 D:FMN500 4.9 24.8 1.0
O C:SER113 4.9 27.4 1.0
OG C:SER113 4.9 27.1 0.5
C C:SER113 5.0 27.1 1.0

Chlorine binding site 4 out of 6 in 3eo8

Go back to Chlorine Binding Sites List in 3eo8
Chlorine binding site 4 out of 6 in the Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl503

b:19.2
occ:1.00
 O D:HOH572 3.0 31.2 1.0
OG1 C:THR163 3.0 27.8 1.0
OG D:SER113 3.1 26.4 0.5
N D:SER113 3.2 28.0 1.0
CB D:SER113 3.4 28.3 0.5
CB D:SER113 3.4 27.9 0.5
N C:SER164 3.6 24.1 1.0
C C:THR163 3.6 24.9 1.0
CA C:SER164 3.7 24.5 1.0
O C:THR163 3.7 23.4 1.0
O D:HOH797 3.8 17.5 1.0
OH D:TYR110 3.9 30.1 1.0
CB D:PRO112 3.9 28.6 1.0
CB C:THR163 3.9 25.1 1.0
CA D:SER113 3.9 28.1 0.5
CA D:SER113 3.9 27.7 0.5
CA D:PRO112 4.2 28.4 1.0
C D:PRO112 4.2 28.2 1.0
CE2 D:TYR110 4.2 27.6 1.0
CA C:THR163 4.2 24.9 1.0
CB C:SER164 4.2 25.1 1.0
CZ D:TYR110 4.5 29.7 1.0
OG D:SER113 4.6 29.2 0.5
CH3 D:ACT501 4.6 23.8 1.0
NZ D:LYS40 4.6 39.7 1.0
CG D:PRO136 4.7 24.8 1.0
N5 C:FMN500 4.7 25.7 1.0
N C:THR163 4.7 25.5 1.0
CB D:PRO136 4.7 25.4 1.0
O D:SER113 4.7 28.4 1.0
O4 C:FMN500 4.8 24.9 1.0
C D:SER113 4.9 27.9 1.0
C C:SER164 4.9 24.4 1.0

Chlorine binding site 5 out of 6 in 3eo8

Go back to Chlorine Binding Sites List in 3eo8
Chlorine binding site 5 out of 6 in the Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl504

b:22.8
occ:1.00
 O E:HOH1913 2.7 34.1 1.0
OG E:SER113 2.8 30.5 1.0
OG1 F:THR163 2.9 26.1 1.0
N E:SER113 3.1 28.7 1.0
CB E:SER113 3.5 29.2 1.0
C F:THR163 3.6 24.2 1.0
O E:HOH1933 3.6 13.4 1.0
N F:SER164 3.6 25.0 1.0
O F:THR163 3.7 25.5 1.0
CA F:SER164 3.7 24.6 1.0
CB E:PRO112 3.8 26.6 1.0
CA E:SER113 3.9 28.9 1.0
CB F:THR163 3.9 23.7 1.0
C E:PRO112 4.1 27.4 1.0
CA E:PRO112 4.1 27.3 1.0
OH E:TYR110 4.1 29.4 1.0
CA F:THR163 4.2 24.2 1.0
CB F:SER164 4.3 24.6 1.0
CE2 E:TYR110 4.4 26.9 1.0
O E:SER113 4.6 29.2 1.0
CG E:PRO136 4.7 25.1 1.0
N5 F:FMN500 4.7 24.9 1.0
N F:THR163 4.7 24.8 1.0
C E:SER113 4.7 29.4 1.0
CZ E:TYR110 4.7 26.9 1.0
CB E:PRO136 4.7 24.0 1.0
CH3 E:ACT501 4.8 21.2 1.0
O4 F:FMN500 4.9 26.9 1.0

Chlorine binding site 6 out of 6 in 3eo8

Go back to Chlorine Binding Sites List in 3eo8
Chlorine binding site 6 out of 6 in the Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Blub-Like Flavoprotein (YP_001089088.1) From Clostridium Difficile 630 at 1.74 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl503

b:20.5
occ:1.00
 OG1 E:THR163 2.9 26.2 1.0
OG F:SER113 2.9 30.4 1.0
O F:HOH1075 2.9 37.0 1.0
N F:SER113 3.1 28.9 1.0
CB F:SER113 3.5 28.9 1.0
C E:THR163 3.6 24.3 1.0
O E:HOH1948 3.6 15.0 1.0
O E:THR163 3.7 23.8 1.0
CB F:PRO112 3.7 29.3 1.0
N E:SER164 3.7 23.6 1.0
CA E:SER164 3.8 23.9 1.0
OH F:TYR110 3.9 31.1 1.0
CB E:THR163 3.9 24.9 1.0
CA F:SER113 3.9 28.6 1.0
CA F:PRO112 4.0 28.9 1.0
C F:PRO112 4.1 29.3 1.0
CA E:THR163 4.2 24.1 1.0
CE2 F:TYR110 4.3 29.7 1.0
CB E:SER164 4.3 25.0 1.0
CZ F:TYR110 4.6 28.6 1.0
CG F:PRO136 4.6 25.4 1.0
CB F:PRO136 4.6 25.6 1.0
CH3 F:ACT501 4.7 25.0 1.0
N E:THR163 4.7 24.6 1.0
O F:SER113 4.8 27.2 1.0
N5 E:FMN500 4.8 27.6 1.0
C F:SER113 4.9 27.9 1.0
O4 E:FMN500 4.9 27.3 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 04:50:08 2025

Last articles

Mg in 1Q6T
Mg in 1Q6Z
Mg in 1Q78
Mg in 1Q6S
Mg in 1Q6R
Mg in 1Q6Q
Mg in 1Q6O
Mg in 1Q6N
Mg in 1Q3U
Mg in 1Q6L
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy