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Chlorine in PDB 3fa5: Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution

Protein crystallography data

The structure of Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution, PDB code: 3fa5 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.50 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 92.579, 139.567, 45.765, 90.00, 90.00, 90.00
R / Rfree (%) 20.5 / 24.8

Other elements in 3fa5:

The structure of Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution (pdb code 3fa5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution, PDB code: 3fa5:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3fa5

Go back to Chlorine Binding Sites List in 3fa5
Chlorine binding site 1 out of 2 in the Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl285

b:39.8
occ:1.00
OG1 A:THR120 3.1 29.2 1.0
NH1 A:ARG91 3.2 50.7 1.0
N A:THR120 3.2 25.1 1.0
O A:HOH360 3.2 36.4 1.0
CD A:PRO119 3.6 25.3 1.0
N A:PRO119 3.7 25.6 1.0
CB A:PHE118 3.8 21.1 1.0
CG A:ARG121 3.8 36.7 1.0
CB A:THR120 3.8 26.4 1.0
CG2 A:THR120 3.9 21.7 1.0
CA A:THR120 4.0 24.9 1.0
CB A:PRO119 4.0 26.5 1.0
C A:PRO119 4.1 24.9 1.0
CA A:PRO119 4.2 26.4 1.0
CG A:PRO119 4.2 28.7 1.0
CD2 A:PHE118 4.2 29.5 1.0
N A:ARG121 4.3 26.2 1.0
C A:PHE118 4.3 20.9 1.0
CG A:PHE118 4.4 25.3 1.0
CZ A:ARG91 4.5 50.4 1.0
C A:THR120 4.5 25.6 1.0
NE A:ARG121 4.6 53.1 1.0
CA A:PHE118 4.7 20.3 1.0
CD A:ARG121 4.7 44.8 1.0
CB A:ARG121 4.9 24.5 1.0

Chlorine binding site 2 out of 2 in 3fa5

Go back to Chlorine Binding Sites List in 3fa5
Chlorine binding site 2 out of 2 in the Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A DUF849 Family Protein (PDEN_3495) From Paracoccus Denitrificans PD1222 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl286

b:59.2
occ:1.00
NE2 A:GLN96 3.3 34.1 1.0
CB A:TRP132 3.9 20.3 1.0
CA A:LEU129 4.0 17.7 1.0
CG A:GLN96 4.0 30.4 1.0
O A:ASP128 4.1 19.1 1.0
CD A:GLN96 4.2 32.2 1.0
N A:LEU129 4.2 17.1 1.0
C A:ASP128 4.2 18.9 1.0
CG A:TRP132 4.2 12.9 1.0
CD1 A:LEU129 4.3 15.1 1.0
OD2 A:ASP128 4.3 10.2 0.5
CG A:ASP128 4.4 19.1 0.5
CB A:LEU129 4.6 17.8 1.0
CD1 A:TRP132 4.7 23.4 1.0
CB A:ASP128 4.7 14.8 0.5
OD1 A:ASP128 4.8 10.3 0.5
CB A:ASP128 4.8 13.7 0.5
CD2 A:TRP132 4.9 10.6 1.0
O A:HOH487 5.0 22.1 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 05:02:14 2025

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