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Chlorine in PDB 3fom: Crystal Structure of the Class I Mhc Molecule H-2KWM7 with A Single Self Peptide Iqqsierl

Protein crystallography data

The structure of Crystal Structure of the Class I Mhc Molecule H-2KWM7 with A Single Self Peptide Iqqsierl, PDB code: 3fom was solved by D.R.Brims, J.Qian, I.Jarchum, T.Yamada, L.Mikesh, E.Palmieri, T.Lund, M.Hattori, J.Shabanowitz, D.F.Hunt, U.A.Ramagopal, V.N.Malashkevich, S.C.Almo, S.G.Nathenson, T.P.Dilorenzo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.82 / 2.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 106.490, 70.648, 72.888, 90.00, 104.21, 90.00
R / Rfree (%) 22.2 / 28.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Class I Mhc Molecule H-2KWM7 with A Single Self Peptide Iqqsierl (pdb code 3fom). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Class I Mhc Molecule H-2KWM7 with A Single Self Peptide Iqqsierl, PDB code: 3fom:

Chlorine binding site 1 out of 1 in 3fom

Go back to Chlorine Binding Sites List in 3fom
Chlorine binding site 1 out of 1 in the Crystal Structure of the Class I Mhc Molecule H-2KWM7 with A Single Self Peptide Iqqsierl


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Class I Mhc Molecule H-2KWM7 with A Single Self Peptide Iqqsierl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl275

b:72.1
occ:1.00
N A:SER193 4.1 39.0 1.0
ND1 A:HIS192 4.2 35.0 1.0
CA A:HIS192 4.3 34.5 1.0
O A:HIS191 4.5 29.4 1.0
C A:HIS192 4.7 36.7 1.0
CB A:HIS192 4.9 34.6 1.0
CB A:SER193 5.0 41.2 1.0

Reference:

D.R.Brims, J.Qian, I.Jarchum, L.Mikesh, E.Palmieri, U.A.Ramagopal, V.N.Malashkevich, R.J.Chaparro, T.Lund, M.Hattori, J.Shabanowitz, D.F.Hunt, S.G.Nathenson, S.C.Almo, T.P.Dilorenzo. Predominant Occupation of the Class I Mhc Molecule H-2KWM7 with A Single Self-Peptide Suggests A Mechanism For Its Diabetes-Protective Effect. Int.Immunol. V. 22 191 2010.
ISSN: ISSN 0953-8178
PubMed: 20093428
DOI: 10.1093/INTIMM/DXP127
Page generated: Fri Jul 11 05:11:31 2025

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