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Chlorine in PDB 3g5l: Crystal Structure of Putative S-Adenosylmethionine Dependent Methyltransferase From Listeria Monocytogenes

Protein crystallography data

The structure of Crystal Structure of Putative S-Adenosylmethionine Dependent Methyltransferase From Listeria Monocytogenes, PDB code: 3g5l was solved by Y.Patskovsky, P.Sampathkumar, M.Gilmore, S.Miller, J.Koss, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center For Structuralgenomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.35
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.812, 92.532, 99.973, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 27.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Putative S-Adenosylmethionine Dependent Methyltransferase From Listeria Monocytogenes (pdb code 3g5l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Putative S-Adenosylmethionine Dependent Methyltransferase From Listeria Monocytogenes, PDB code: 3g5l:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3g5l

Go back to Chlorine Binding Sites List in 3g5l
Chlorine binding site 1 out of 2 in the Crystal Structure of Putative S-Adenosylmethionine Dependent Methyltransferase From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Putative S-Adenosylmethionine Dependent Methyltransferase From Listeria Monocytogenes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl252

b:18.9
occ:1.00
O A:HOH269 3.1 43.9 1.0
N A:PHE122 3.1 11.8 1.0
N A:ASP123 3.3 8.0 1.0
O A:HOH270 3.4 22.0 1.0
CB A:PHE122 3.7 18.4 1.0
CA A:PHE122 3.8 15.2 1.0
CD A:ARG192 3.9 20.9 1.0
C A:SER121 3.9 16.7 1.0
CB A:ASP123 4.0 7.1 1.0
C A:PHE122 4.0 13.1 1.0
CA A:SER121 4.0 8.9 0.5
CA A:SER121 4.0 12.4 0.5
O A:HOH268 4.1 13.0 1.0
CA A:ASP123 4.2 15.4 1.0
OG A:SER121 4.3 26.1 0.5
O A:ALA120 4.4 12.8 1.0
OG A:SER121 4.4 2.0 0.5
NH1 A:ARG192 4.5 2.0 1.0
CG2 A:THR196 4.5 11.1 1.0
NE A:ARG192 4.7 3.7 1.0
CB A:SER121 4.8 11.8 0.5
CB A:SER121 4.8 9.0 0.5
CG A:PHE122 4.8 12.4 1.0
O A:SER121 4.9 17.0 1.0
CD2 A:PHE122 4.9 2.1 1.0
CG A:ARG192 4.9 12.2 1.0
CZ A:ARG192 4.9 14.5 1.0
OG1 A:THR200 5.0 9.1 1.0

Chlorine binding site 2 out of 2 in 3g5l

Go back to Chlorine Binding Sites List in 3g5l
Chlorine binding site 2 out of 2 in the Crystal Structure of Putative S-Adenosylmethionine Dependent Methyltransferase From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Putative S-Adenosylmethionine Dependent Methyltransferase From Listeria Monocytogenes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl252

b:26.3
occ:1.00
O B:HOH285 3.1 30.5 1.0
N B:PHE122 3.1 24.0 1.0
N B:ASP123 3.4 17.9 1.0
CB B:PHE122 3.8 22.1 1.0
CA B:PHE122 3.8 24.9 1.0
C B:SER121 4.0 14.8 1.0
CA B:SER121 4.0 15.2 0.5
CA B:SER121 4.0 16.9 0.5
C B:PHE122 4.1 16.4 1.0
CD B:ARG192 4.1 21.8 1.0
O B:ALA120 4.2 25.9 1.0
CB B:ASP123 4.2 19.9 1.0
NH1 B:ARG192 4.4 11.6 1.0
CA B:ASP123 4.4 17.3 1.0
OG B:SER121 4.5 18.9 0.5
CG2 B:THR196 4.6 13.0 1.0
CB B:SER121 4.9 11.8 0.5
CB B:SER121 4.9 13.6 0.5
CG B:PHE122 4.9 18.6 1.0
NE B:ARG192 4.9 23.9 1.0

Reference:

Y.Patskovsky, P.Sampathkumar, M.Gilmore, S.Miller, J.Koss, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of S-Adenosylmethionine Dependent Methyltransferase From Listeria Monocytogenes To Be Published.
Page generated: Fri Jul 11 05:30:16 2025

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