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Chlorine in PDB 3g7q: Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution

Enzymatic activity of Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution

All present enzymatic activity of Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution:
2.6.1.66;

Protein crystallography data

The structure of Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution, PDB code: 3g7q was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.28 / 1.80
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 92.280, 92.280, 227.330, 90.00, 90.00, 120.00
R / Rfree (%) 17.8 / 19.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution (pdb code 3g7q). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution, PDB code: 3g7q:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3g7q

Go back to Chlorine Binding Sites List in 3g7q
Chlorine binding site 1 out of 3 in the Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl417

b:57.7
occ:1.00
 NZ A:LYS62 3.1 40.3 1.0
OG A:SER60 3.2 32.1 1.0
NH2 A:ARG295 3.4 60.0 1.0
O A:ASP56 3.5 30.6 1.0
CD A:LYS62 3.6 39.1 1.0
CE A:LYS62 3.7 41.1 1.0
C A:ASP56 3.7 32.0 1.0
CB A:SER60 3.7 30.2 1.0
CB A:ASP56 3.9 33.1 1.0
N A:MSE57 3.9 30.2 1.0
OE2 A:GLU291 4.0 50.5 1.0
CA A:MSE57 4.0 28.6 1.0
O A:HOH560 4.2 49.8 1.0
CD A:GLU291 4.2 42.1 1.0
CG A:MSE57 4.3 30.9 1.0
O A:HOH600 4.4 56.1 1.0
CA A:ASP56 4.5 31.9 1.0
OE1 A:GLU291 4.5 43.6 1.0
CG A:LYS62 4.7 36.8 1.0
CZ A:ARG295 4.7 53.6 1.0
CB A:MSE57 4.7 29.4 1.0
CG A:GLU291 4.9 44.6 1.0

Chlorine binding site 2 out of 3 in 3g7q

Go back to Chlorine Binding Sites List in 3g7q
Chlorine binding site 2 out of 3 in the Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl418

b:43.8
occ:0.50
 O A:HOH497 2.9 40.5 1.0
O A:HOH436 3.1 30.2 1.0
CD A:ARG322 3.8 32.9 1.0
CB A:GLU162 4.0 30.5 1.0
NE A:ARG322 4.0 33.2 1.0
CA A:GLU162 4.1 29.3 1.0
CG A:ARG322 4.3 30.8 1.0
CG A:GLU162 4.3 28.9 1.0
O A:GLU162 4.3 30.4 1.0
OE1 A:GLU162 4.3 32.8 1.0
C A:GLU162 4.5 28.8 1.0
O A:HOH423 4.5 26.7 1.0
CD A:GLU162 4.5 30.7 1.0
O A:HOH460 4.6 34.2 0.5
CB A:ARG322 4.8 28.9 1.0
O A:HOH467 4.9 35.6 1.0

Chlorine binding site 3 out of 3 in 3g7q

Go back to Chlorine Binding Sites List in 3g7q
Chlorine binding site 3 out of 3 in the Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Valine-Pyruvate Aminotransferase Avta (NP_462565.1) From Salmonella Typhimurium LT2 at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl419

b:65.7
occ:1.00
 NE2 A:GLN312 2.7 78.7 1.0
O A:HOH676 2.9 68.2 1.0
O A:PHE309 3.1 30.8 1.0
CG A:ARG313 3.4 37.2 0.5
CD A:GLN312 3.5 65.8 1.0
CD2 A:PHE309 3.6 34.1 1.0
CD A:ARG313 3.6 41.8 0.5
NE A:ARG313 3.7 46.3 0.5
CB A:GLN312 3.7 35.0 1.0
CE2 A:PHE309 3.8 35.8 1.0
C A:PHE309 3.9 31.6 1.0
CG A:PHE309 4.0 31.1 1.0
CA A:PHE309 4.0 30.9 1.0
N A:ARG313 4.0 31.4 0.5
NH2 A:ARG313 4.0 50.2 0.5
N A:ARG313 4.1 31.1 0.5
CG A:GLN312 4.1 45.1 1.0
OE1 A:GLN312 4.2 69.4 1.0
CB A:ARG313 4.3 31.9 0.5
CZ A:ARG313 4.3 41.9 0.5
CZ A:PHE309 4.3 34.3 1.0
CB A:ARG313 4.5 33.1 0.5
CD1 A:PHE309 4.5 35.8 1.0
CA A:ARG313 4.5 31.5 0.5
CB A:PHE309 4.5 29.9 1.0
C A:GLN312 4.6 30.3 1.0
CA A:ARG313 4.6 32.3 0.5
NH1 A:ARG313 4.6 45.4 0.5
CD A:ARG313 4.6 41.7 0.5
CE1 A:PHE309 4.6 34.9 1.0
NE2 A:GLN316 4.7 34.2 0.5
CA A:GLN312 4.7 32.2 1.0
NE A:ARG313 4.8 43.4 0.5
O A:PRO308 4.9 32.0 1.0
CG A:ARG313 5.0 33.8 0.5

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 05:34:55 2025

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