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Chlorine in PDB 3gg9: Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum

Enzymatic activity of Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum

All present enzymatic activity of Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum:
1.1.1.95;

Protein crystallography data

The structure of Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum, PDB code: 3gg9 was solved by Y.Patskovsky, U.Ramagopal, R.Toro, C.Morano, J.Freeman, S.Chang, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 92.034, 97.625, 97.808, 90.00, 114.96, 90.00
R / Rfree (%) 19.9 / 26.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum (pdb code 3gg9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum, PDB code: 3gg9:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3gg9

Go back to Chlorine Binding Sites List in 3gg9
Chlorine binding site 1 out of 2 in the Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1

b:47.1
occ:1.00
O C:HOH486 3.0 52.6 1.0
O C:HOH642 3.1 43.7 1.0
O C:HOH397 3.3 30.2 1.0
NE C:ARG67 3.4 38.7 1.0
NH2 C:ARG67 3.6 38.3 1.0
NH2 C:ARG65 3.7 48.9 1.0
CD C:ARG65 3.7 42.8 1.0
CB C:ARG65 3.8 42.8 1.0
CG C:ARG65 3.9 45.0 1.0
CZ C:ARG67 4.0 41.5 1.0
CD2 C:HIS309 4.1 43.4 1.0
NE2 C:HIS309 4.2 51.9 1.0
CG C:ARG67 4.3 33.7 1.0
CD C:ARG67 4.4 36.2 1.0
CZ C:ARG65 4.6 43.3 1.0
NE C:ARG65 4.6 47.8 1.0
CG2 C:ILE64 4.6 31.6 1.0
O C:ILE64 4.7 43.0 1.0
CB C:TYR312 4.7 43.1 1.0
CG C:HIS309 4.7 46.4 1.0
O C:HIS309 4.8 34.1 1.0
CE1 C:HIS309 4.9 55.5 1.0
CA C:ARG65 5.0 40.1 1.0

Chlorine binding site 2 out of 2 in 3gg9

Go back to Chlorine Binding Sites List in 3gg9
Chlorine binding site 2 out of 2 in the Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase Oxidoreductase From Ralstonia Solanacearum within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl1

b:39.7
occ:1.00
O D:HOH495 3.0 32.2 1.0
O D:HOH465 3.3 41.1 1.0
O D:HOH430 3.5 38.9 1.0
CD D:ARG65 3.6 35.7 1.0
NE D:ARG67 3.7 36.4 1.0
CB D:ARG65 3.8 38.8 1.0
NH2 D:ARG67 3.8 33.2 1.0
CG D:ARG65 3.9 37.2 1.0
NH2 D:ARG65 4.0 42.0 1.0
CZ D:ARG67 4.2 30.7 1.0
NE2 D:HIS309 4.4 33.5 1.0
CB D:TYR312 4.4 31.5 1.0
CG2 D:ILE64 4.5 25.9 1.0
O D:HIS309 4.6 31.2 1.0
CD2 D:HIS309 4.6 36.1 1.0
CE1 D:HIS309 4.6 35.2 1.0
CG D:ARG67 4.7 32.1 1.0
NE D:ARG65 4.7 37.0 1.0
O D:ILE64 4.7 31.4 1.0
CD D:ARG67 4.8 32.6 1.0
CG D:HIS309 4.8 31.5 1.0
CZ D:ARG65 4.8 35.0 1.0
ND1 D:HIS309 4.9 40.4 1.0
CG2 D:VAL313 4.9 26.5 1.0
CD2 D:TYR312 5.0 35.8 1.0
CA D:ARG65 5.0 37.3 1.0

Reference:

Y.Patskovsky, U.Ramagopal, R.Toro, C.Morano, J.Freeman, S.Chang, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase From Ralstonia Solanacearum To Be Published.
Page generated: Sat Jul 20 20:19:49 2024

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