Chlorine in PDB 3hfr: Crystal Structure of Glutamate Racemase From Listeria Monocytogenes

All present enzymatic activity of Crystal Structure of Glutamate Racemase From Listeria Monocytogenes:
5.1.1.3;

The structure of Crystal Structure of Glutamate Racemase From Listeria Monocytogenes, PDB code: 3hfr was solved by K.A.Majorek, M.Chruszcz, M.D.Zimmerman, M.M.Klimecka, M.Cymborowski, T.Skarina, O.Onopriyenko, J.Stam, Z.Otwinowski, W.F.Anderson, A.Savchenko, W.Minor, Center For Structural Genomics Of Infectiousdiseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.30
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	66.651, 66.651, 257.990, 90.00, 90.00, 90.00
R / Rfree (%)	18.8 / 24.4

The binding sites of Chlorine atom in the Crystal Structure of Glutamate Racemase From Listeria Monocytogenes (pdb code 3hfr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Glutamate Racemase From Listeria Monocytogenes, PDB code: 3hfr:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of Glutamate Racemase From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Glutamate Racemase From Listeria Monocytogenes within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl267 b:44.1 occ:1.00 O A:HOH272 3.1 17.3 1.0 O A:HOH288 3.2 23.7 1.0 O A:HOH395 3.3 36.7 1.0 OG1 A:THR116 3.4 26.9 1.0 N A:THR74 3.5 23.0 1.0 CG2 A:THR116 3.7 26.3 1.0 OG1 A:THR119 3.7 27.9 1.0 CG2 A:THR74 3.9 22.0 1.0 CB A:THR74 3.9 23.1 1.0 CB A:ASN73 3.9 23.5 1.0 N A:ASN73 3.9 23.6 1.0 SG A:CYS183 4.0 22.9 1.0 CB A:THR116 4.2 27.7 1.0 CA A:ASN73 4.2 23.4 1.0 O A:HOH378 4.3 32.4 1.0 CA A:THR74 4.3 22.9 1.0 C A:ASN73 4.3 23.3 1.0 CB A:CYS183 4.3 22.7 1.0 SG A:CYS72 4.4 25.5 1.0 CA A:CYS183 4.5 22.3 1.0 O A:GLY182 4.8 22.1 1.0 ND2 A:ASN73 4.8 24.0 1.0 CB A:THR119 4.9 28.7 1.0 C A:CYS72 4.9 23.6 1.0 CG A:ASN73 4.9 24.3 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of Glutamate Racemase From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Glutamate Racemase From Listeria Monocytogenes within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl268 b:52.1 occ:1.00 N A:LEU117 3.3 28.3 1.0 CB A:THR116 3.7 27.7 1.0 CG A:LEU117 3.8 29.2 1.0 CA A:THR116 3.8 27.3 1.0 CD1 A:LEU117 3.8 29.5 1.0 CA A:PRO144 3.9 26.1 1.0 CA A:GLY42 3.9 26.2 1.0 CB A:LEU117 4.0 28.8 1.0 C A:THR116 4.1 27.9 1.0 CG2 A:THR116 4.1 26.3 1.0 C A:GLY42 4.2 26.1 1.0 O A:HOH276 4.2 20.6 1.0 CB A:PRO144 4.2 26.3 1.0 CA A:LEU117 4.3 28.6 1.0 O A:HOH297 4.3 36.0 1.0 N A:PRO43 4.5 26.4 1.0 O A:PRO144 4.5 26.6 1.0 CD A:PRO43 4.6 26.2 1.0 O A:GLY42 4.6 26.3 1.0 N A:PRO144 4.7 26.2 1.0 C A:PRO144 4.7 26.2 1.0 CG A:PRO144 4.8 26.3 1.0 OG1 A:THR116 4.9 26.9 1.0 N A:GLY42 5.0 25.9 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of Glutamate Racemase From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Glutamate Racemase From Listeria Monocytogenes within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl267 b:64.0 occ:1.00 O B:HOH333 3.1 23.5 1.0 O B:HOH309 3.2 11.6 1.0 OD1 B:ASN73 3.2 24.4 1.0 N B:THR184 3.3 22.7 1.0 CA B:CYS183 3.5 22.7 1.0 OG1 B:THR184 3.6 24.1 1.0 CG B:ASN73 3.7 22.9 1.0 CG2 B:THR184 3.9 22.8 1.0 C B:CYS183 3.9 22.6 1.0 SG B:CYS183 3.9 22.9 1.0 CB B:CYS183 4.1 22.7 1.0 N B:ASN73 4.1 21.9 1.0 CB B:THR184 4.2 23.3 1.0 O B:ALA71 4.2 20.2 1.0 O B:HOH277 4.2 27.3 1.0 ND2 B:ASN73 4.2 23.3 1.0 CB B:ASN73 4.3 22.2 1.0 CA B:THR184 4.3 23.1 1.0 O B:GLY182 4.5 23.8 1.0 N B:CYS183 4.7 23.0 1.0 CA B:ASN73 4.9 22.1 1.0 CA B:CYS72 4.9 21.1 1.0 C B:GLY182 5.0 23.0 1.0

K.A.Majorek, M.Chruszcz, M.D.Zimmerman, M.M.Klimecka, M.Cymborowski, T.Skarina, O.Onopriyenko, J.Stam, Z.Otwinowski, W.F.Anderson, A.Savchenko, W.Minor, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Glutamate Racemase From Listeria Monocytogenes To Be Published.