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Chlorine in PDB 3k2k: Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution

Protein crystallography data

The structure of Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution, PDB code: 3k2k was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.55 / 2.49
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 162.375, 162.375, 148.397, 90.00, 90.00, 90.00
R / Rfree (%) 15.6 / 18.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution (pdb code 3k2k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution, PDB code: 3k2k:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 3k2k

Go back to Chlorine Binding Sites List in 3k2k
Chlorine binding site 1 out of 4 in the Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl385

b:64.8
occ:1.00
OD1 A:ASP311 3.1 40.6 0.5
N A:ASP311 3.1 35.0 1.0
CE A:LYS303 3.6 45.3 1.0
CB A:GLN310 3.6 27.6 1.0
CA A:GLN310 3.7 30.7 1.0
N A:GLU312 3.8 37.4 1.0
C A:GLN310 3.9 31.6 1.0
NZ A:LYS303 3.9 55.2 1.0
CG A:ASP311 4.1 37.8 0.5
CA A:ASP311 4.1 36.3 0.5
CA A:ASP311 4.1 36.7 0.5
C A:ASP311 4.3 37.1 1.0
CB A:ASP311 4.4 36.0 0.5
CB A:GLU312 4.4 41.3 1.0
CD A:LYS303 4.5 45.0 1.0
O A:HOH419 4.6 34.3 1.0
CB A:ASP311 4.6 36.6 0.5
CA A:GLU312 4.7 39.2 1.0
OE1 A:GLN310 4.8 28.1 1.0
O A:HOH516 4.8 41.5 1.0
CG A:LYS303 4.8 42.0 1.0
CG A:GLN310 4.9 29.9 1.0

Chlorine binding site 2 out of 4 in 3k2k

Go back to Chlorine Binding Sites List in 3k2k
Chlorine binding site 2 out of 4 in the Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl386

b:69.4
occ:1.00
OG A:SER7 3.1 24.9 1.0
O A:HOH515 3.4 36.0 1.0
N A:ILE14 3.5 29.8 1.0
CA A:ALA13 3.5 27.9 1.0
CD A:ARG30 3.7 27.1 1.0
O A:HOH446 3.7 51.5 1.0
O A:ILE14 3.7 35.1 1.0
NH1 A:ARG30 3.7 34.9 1.0
O A:GLY12 4.0 26.2 1.0
C A:ALA13 4.0 27.6 1.0
CB A:SER7 4.1 29.2 1.0
N A:ALA13 4.1 28.5 1.0
O A:HOH509 4.1 63.2 1.0
C A:GLY12 4.2 28.7 1.0
O A:SER7 4.3 27.0 1.0
C A:ILE14 4.6 32.5 1.0
CG A:ARG30 4.6 30.1 1.0
NE A:ARG30 4.6 34.3 1.0
CB A:ALA13 4.6 24.8 1.0
CZ A:ARG30 4.6 26.5 1.0
CA A:ILE14 4.6 30.4 1.0
C A:SER7 4.9 25.9 1.0
CB A:ARG30 5.0 28.5 1.0

Chlorine binding site 3 out of 4 in 3k2k

Go back to Chlorine Binding Sites List in 3k2k
Chlorine binding site 3 out of 4 in the Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl387

b:67.8
occ:1.00
NH1 A:ARG236 2.8 57.4 1.0
ND2 A:ASN235 3.3 22.7 1.0
CE1 A:HIS171 3.4 38.8 1.0
NH2 A:ARG226 3.4 51.8 1.0
NH2 A:ARG236 3.5 51.2 1.0
CZ A:ARG236 3.6 45.7 1.0
NE2 A:HIS171 4.0 25.4 1.0
CB A:ASN235 4.0 33.1 1.0
CG A:ASN235 4.1 36.6 1.0
OH A:TYR320 4.3 73.8 1.0
CZ A:TYR320 4.4 74.5 1.0
CZ A:ARG226 4.5 56.8 1.0
CD2 A:LEU327 4.6 33.9 1.0
ND1 A:HIS171 4.6 39.7 1.0
CG A:LEU327 4.6 36.8 1.0
O A:HOH538 4.7 41.1 1.0
CE1 A:HIS268 4.7 50.3 1.0
NH1 A:ARG226 4.7 57.7 1.0
CE2 A:TYR320 4.7 76.0 1.0
O A:ASN235 4.8 34.9 1.0
CE1 A:TYR320 4.9 77.7 1.0
NE A:ARG236 4.9 39.3 1.0

Chlorine binding site 4 out of 4 in 3k2k

Go back to Chlorine Binding Sites List in 3k2k
Chlorine binding site 4 out of 4 in the Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Putative Carboxypeptidase (YP_103406.1) From Burkholderia Mallei Atcc 23344 at 2.49 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl388

b:54.0
occ:0.50
NH2 A:ARG335 3.1 28.5 1.0
NH1 A:ARG335 3.2 30.9 1.0
CZ A:ARG335 3.6 27.5 1.0
O A:HOH464 3.7 25.0 1.0
CE1 A:PHE336 3.8 26.6 1.0
CD1 A:PHE336 4.0 29.1 1.0
NE A:ARG335 4.9 32.8 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 06:49:55 2025

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