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Chlorine in PDB 3k3l: Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Apo Enterobactin

Protein crystallography data

The structure of Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Apo Enterobactin, PDB code: 3k3l was solved by M.C.Clifton, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.25 / 2.62
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 114.200, 114.200, 119.300, 90.00, 90.00, 90.00
R / Rfree (%) 26 / 30.7

Other elements in 3k3l:

The structure of Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Apo Enterobactin also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Apo Enterobactin (pdb code 3k3l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Apo Enterobactin, PDB code: 3k3l:

Chlorine binding site 1 out of 1 in 3k3l

Go back to Chlorine Binding Sites List in 3k3l
Chlorine binding site 1 out of 1 in the Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Apo Enterobactin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Apo Enterobactin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl185

b:67.9
occ:1.00
NE2 C:HIS165 3.8 33.5 1.0
O C:HOH218 3.9 36.9 1.0
CD2 C:HIS165 4.1 32.8 1.0
OD1 C:ASN164 4.3 35.5 1.0
ND2 C:ASN164 4.3 34.9 1.0
CG C:PRO162 4.6 32.7 1.0
CG C:ASN164 4.8 34.2 1.0

Reference:

M.C.Clifton, P.B.Rupert, T.M.Hoette, K.N.Raymond, R.J.Abergel, R.K.Strong. Parsing the Functional Specificity of Siderocalin / Lipocalin 2 / Ngal For Siderophores and Related Small-Molecule Ligands To Be Published.
Page generated: Fri Jul 11 06:50:59 2025

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