Atomistry » Chlorine » PDB 3k9u-3khi » 3kan
Atomistry »
  Chlorine »
    PDB 3k9u-3khi »
      3kan »

Chlorine in PDB 3kan: D-Dopachrome Tautomerase (D-Dt)/Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp

Protein crystallography data

The structure of D-Dopachrome Tautomerase (D-Dt)/Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp, PDB code: 3kan was solved by S.Zierow, E.Lolis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.06 / 1.13
Space group P 3
Cell size a, b, c (Å), α, β, γ (°) 83.286, 83.286, 40.303, 90.00, 90.00, 120.00
R / Rfree (%) 11.2 / 12.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the D-Dopachrome Tautomerase (D-Dt)/Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp (pdb code 3kan). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the D-Dopachrome Tautomerase (D-Dt)/Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp, PDB code: 3kan:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3kan

Go back to Chlorine Binding Sites List in 3kan
Chlorine binding site 1 out of 2 in the D-Dopachrome Tautomerase (D-Dt)/Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of D-Dopachrome Tautomerase (D-Dt)/Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl118

b:12.3
occ:1.00
OG A:SER63 2.9 9.2 1.0
O A:HOH273 3.0 74.8 1.0
N A:ILE64 3.2 6.7 1.0
NZ A:LYS32 3.3 15.2 1.0
C4 A:RW1120 3.3 8.9 1.0
C5 A:RW1120 3.5 10.6 1.0
N A:PRO1 3.5 7.3 1.0
CA A:SER63 3.7 5.8 1.0
CE A:LYS32 3.7 11.9 1.0
CA A:PRO1 3.7 6.3 1.0
CB A:SER63 3.8 7.0 1.0
N3 A:RW1120 3.9 9.5 1.0
CD A:PRO1 3.9 8.4 1.0
C A:SER63 4.0 5.8 1.0
C6 A:RW1120 4.0 12.5 1.0
CD A:LYS32 4.1 9.8 1.0
CB A:ILE64 4.1 8.7 1.0
CB A:PRO1 4.1 7.1 1.0
CA A:ILE64 4.1 7.4 1.0
CG1 A:ILE64 4.3 11.7 1.0
O A:ILE64 4.3 8.8 1.0
C2 A:RW1120 4.3 12.2 1.0
N1 A:RW1120 4.4 13.0 1.0
CG A:PRO1 4.6 8.2 1.0
C A:ILE64 4.7 6.8 1.0
C7 A:RW1120 4.8 14.7 1.0
C12 A:RW1120 4.8 15.5 1.0
O A:SER62 4.9 6.0 1.0
CG A:LYS32 4.9 8.9 1.0
N A:SER63 5.0 5.0 1.0

Chlorine binding site 2 out of 2 in 3kan

Go back to Chlorine Binding Sites List in 3kan
Chlorine binding site 2 out of 2 in the D-Dopachrome Tautomerase (D-Dt)/Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of D-Dopachrome Tautomerase (D-Dt)/Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl118

b:11.4
occ:1.00
OG B:SER63 3.0 8.3 1.0
N B:ILE64 3.2 5.5 1.0
O B:HOH275 3.3 28.8 1.0
NZ B:LYS32 3.3 14.5 1.0
O B:HOH244 3.3 24.0 1.0
C4 B:RW1120 3.4 6.5 1.0
N B:PRO1 3.6 5.6 1.0
C5 B:RW1120 3.6 6.7 1.0
CA B:SER63 3.7 5.1 1.0
CE B:LYS32 3.7 10.1 1.0
CA B:PRO1 3.8 5.1 1.0
CB B:SER63 3.8 6.2 1.0
N3 B:RW1120 3.9 6.8 1.0
CD B:PRO1 3.9 6.3 1.0
CD B:LYS32 3.9 8.8 1.0
C B:SER63 4.0 4.6 1.0
CB B:ILE64 4.1 7.0 1.0
CB B:PRO1 4.2 5.9 1.0
CA B:ILE64 4.2 5.8 1.0
C6 B:RW1120 4.2 7.1 1.0
CG1 B:ILE64 4.2 8.7 1.0
O B:ILE64 4.3 7.5 1.0
C2 B:RW1120 4.4 7.6 1.0
N1 B:RW1120 4.6 8.2 1.0
CG B:PRO1 4.7 6.6 1.0
CG B:LYS32 4.7 7.1 1.0
C B:ILE64 4.8 5.6 1.0
C12 B:RW1120 4.9 9.9 1.0
O B:SER62 4.9 5.7 1.0
CD1 B:ILE64 4.9 11.1 1.0
C7 B:RW1120 4.9 8.0 1.0
N B:SER63 5.0 4.6 1.0

Reference:

S.Zierow, E.Lolis. Crystal Structure of D-Dopachrome Tautomerase (D-Dt)/Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp To Be Published.
Page generated: Fri Jul 11 06:56:02 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy