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Chlorine in PDB 3kh2: Crystal Structure of the P1 Bacteriophage Doc Toxin (F68S) in Complex with the Phd Antitoxin (L17M/V39A). Northeast Structural Genomics Targets ER385-ER386

Protein crystallography data

The structure of Crystal Structure of the P1 Bacteriophage Doc Toxin (F68S) in Complex with the Phd Antitoxin (L17M/V39A). Northeast Structural Genomics Targets ER385-ER386, PDB code: 3kh2 was solved by M.A.Arbing, A.P.Kuzin, M.Su, M.Abashidze, G.Verdon, M.Liu, R.Xiao, T.Acton, M.Inouye, G.T.Montelione, N.A.Woychik, J.F.Hunt, Northeast Structuralgenomics Consortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.71
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 95.899, 111.277, 118.747, 90.00, 90.00, 90.00
R / Rfree (%) 21.7 / 26.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the P1 Bacteriophage Doc Toxin (F68S) in Complex with the Phd Antitoxin (L17M/V39A). Northeast Structural Genomics Targets ER385-ER386 (pdb code 3kh2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the P1 Bacteriophage Doc Toxin (F68S) in Complex with the Phd Antitoxin (L17M/V39A). Northeast Structural Genomics Targets ER385-ER386, PDB code: 3kh2:

Chlorine binding site 1 out of 1 in 3kh2

Go back to Chlorine Binding Sites List in 3kh2
Chlorine binding site 1 out of 1 in the Crystal Structure of the P1 Bacteriophage Doc Toxin (F68S) in Complex with the Phd Antitoxin (L17M/V39A). Northeast Structural Genomics Targets ER385-ER386


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the P1 Bacteriophage Doc Toxin (F68S) in Complex with the Phd Antitoxin (L17M/V39A). Northeast Structural Genomics Targets ER385-ER386 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1001

b:46.2
occ:1.00
NE A:ARG74 3.5 28.7 1.0
CA A:ALA71 3.6 27.7 1.0
CB A:LYS73 3.6 24.6 1.0
N A:ARG74 3.8 23.1 1.0
O E:LEU70 3.8 46.4 1.0
C A:ALA71 3.8 25.7 1.0
N A:LYS73 3.8 23.5 1.0
NH2 A:ARG74 4.0 30.2 1.0
CG A:ARG74 4.0 26.1 1.0
N A:ASN72 4.0 25.1 1.0
N A:ALA71 4.0 29.0 1.0
NZ A:LYS73 4.1 29.9 1.0
CE A:LYS73 4.1 29.4 1.0
CA A:LYS73 4.1 23.3 1.0
CZ A:ARG74 4.2 29.0 1.0
CD A:ARG74 4.3 27.8 1.0
O A:ALA71 4.3 24.9 1.0
C E:LEU70 4.4 45.1 1.0
C A:LYS73 4.4 22.9 1.0
CG A:LYS73 4.4 25.7 1.0
CB A:ARG74 4.4 24.1 1.0
CB E:LEU70 4.5 40.6 1.0
CA A:ARG74 4.7 23.2 1.0
OD1 A:ASP70 4.7 51.3 1.0
CB A:ALA71 4.8 27.8 1.0
C A:ASN72 4.8 23.2 1.0
CD A:LYS73 4.9 27.7 1.0
N E:VAL71 4.9 46.0 1.0
CA E:VAL71 5.0 48.6 1.0

Reference:

M.A.Arbing, S.K.Handelman, A.P.Kuzin, G.Verdon, C.Wang, M.Su, F.P.Rothenbacher, M.Abashidze, M.Liu, J.M.Hurley, R.Xiao, T.Acton, M.Inouye, G.T.Montelione, N.A.Woychik, J.F.Hunt. Crystal Structures of Phd-Doc, Higa, and Yeeu Establish Multiple Evolutionary Links Between Microbial Growth-Regulating Toxin-Antitoxin Systems. Structure V. 18 996 2010.
ISSN: ISSN 0969-2126
PubMed: 20696400
DOI: 10.1016/J.STR.2010.04.018
Page generated: Fri Jul 11 07:00:09 2025

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