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Chlorine in PDB 3ks6: Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterase (17743486) From Agrobacterium Tumefaciens Str. C58 (Dupont) at 1.80 A Resolution

Protein crystallography data

The structure of Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterase (17743486) From Agrobacterium Tumefaciens Str. C58 (Dupont) at 1.80 A Resolution, PDB code: 3ks6 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.83 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 83.427, 99.797, 134.656, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 20.5

Other elements in 3ks6:

The structure of Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterase (17743486) From Agrobacterium Tumefaciens Str. C58 (Dupont) at 1.80 A Resolution also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterase (17743486) From Agrobacterium Tumefaciens Str. C58 (Dupont) at 1.80 A Resolution (pdb code 3ks6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterase (17743486) From Agrobacterium Tumefaciens Str. C58 (Dupont) at 1.80 A Resolution, PDB code: 3ks6:

Chlorine binding site 1 out of 1 in 3ks6

Go back to Chlorine Binding Sites List in 3ks6
Chlorine binding site 1 out of 1 in the Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterase (17743486) From Agrobacterium Tumefaciens Str. C58 (Dupont) at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterase (17743486) From Agrobacterium Tumefaciens Str. C58 (Dupont) at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl252

b:25.6
occ:1.00
O A:HOH272 3.1 27.1 1.0
N A:THR2 3.2 22.4 1.0
NH2 A:ARG244 3.2 19.9 1.0
NE A:ARG244 3.2 22.4 1.0
CA A:MSE1 3.5 28.3 1.0
CB A:MSE1 3.7 29.9 1.0
CZ A:ARG244 3.7 24.2 1.0
O A:THR2 3.8 22.9 1.0
C A:MSE1 3.9 26.8 1.0
CD A:ARG240 3.9 20.6 1.0
CA A:THR2 4.2 20.6 1.0
CG A:ARG240 4.4 20.2 1.0
C A:THR2 4.4 22.3 1.0
CD A:ARG244 4.4 23.7 1.0
CG A:ARG244 4.5 21.3 1.0
CB A:THR2 4.5 21.4 1.0
O A:GLY0 4.6 43.8 1.0
O A:HOH1308 4.6 55.0 1.0
O A:HOH518 4.7 33.6 1.0
N A:MSE1 4.8 33.2 1.0
NE A:ARG240 4.8 19.1 1.0
O A:HOH382 4.8 30.3 1.0
CG A:MSE1 4.8 28.0 1.0
NH1 A:ARG240 4.9 19.5 1.0
CE A:MSE1 4.9 27.9 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 07:04:25 2025

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